RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 AFDNP55196 1824 aaKnown RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 CTSWP56202 376 aa7.24□□□□□ -1.25
CYLD-216ENST00000569891 ZSCAN31Q96LW9 406 aaPredicted RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 TMX4Q9H1E5 349 aaPredicted RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 SALL3Q9BXA9 1300 aa7.24□□□□□ -1.25
CYLD-216ENST00000569891 PTPN12Q05209 780 aaKnown RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 U3KPZ7 1027 aaPredicted RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 AFF2P51816 1311 aa7.24□□□□□ -1.25
CYLD-216ENST00000569891 HMGB1P09429 215 aaKnown RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 CCNL1Q9UK58 526 aaPredicted RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 PA2G4Q9UQ80 394 aaKnown RBP7.24□□□□□ -1.25
CYLD-216ENST00000569891 SLC27A3Q5K4L6 730 aa7.24□□□□□ -1.25
CYLD-216ENST00000569891 NIP7Q9Y221 180 aaKnown RBP eCLIP7.24□□□□□ -1.25
CYLD-216ENST00000569891 UBR3Q6ZT12 1888 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 RPS6KA4O75676 772 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 TPTE2Q6XPS3 522 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 SETDB2Q96T68 719 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 CCDC8Q9H0W5 538 aaPredicted RBP7.23□□□□□ -1.25
CYLD-216ENST00000569891 NRXN2Q9P2S2 1712 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 SGSM2O43147 1006 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 PIP4K2AP48426 406 aaPredicted RBP7.23□□□□□ -1.25
CYLD-216ENST00000569891 TFCP2Q12800 502 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 FLAD1Q8NFF5 587 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 TBC1D2Q9BYX2 928 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 HELLSQ9NRZ9 838 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.23□□□□□ -1.25
CYLD-216ENST00000569891 GPTP24298 496 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 ATP2B3Q16720 1220 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 SKOR2Q2VWA4 1001 aaPredicted RBP7.23□□□□□ -1.25
CYLD-216ENST00000569891 ZNF34Q8IZ26 560 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 PI4K2BQ8TCG2 481 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 ATP6V1DQ9Y5K8 247 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 DOT1LQ8TEK3 1739 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 BTAF1O14981 1849 aa7.23□□□□□ -1.25
CYLD-216ENST00000569891 CSF1RP07333 972 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 RFC4P35249 363 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 CASP7P55210 303 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 FOXO4P98177 505 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 CSPP1Q1MSJ5 1256 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 OTUD7AQ8TE49 926 aaPredicted RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 CELSR3Q9NYQ7 3312 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 SEC24BO95487 1268 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 NCLP19338 710 aaKnown RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 DNAJC2Q99543 621 aaKnown RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 HAUS7Q99871 368 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 BCL11BQ9C0K0 894 aaPredicted RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 SH2B1Q9NRF2 756 aaPredicted RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 CYP46A1Q9Y6A2 500 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 PAPPA2Q9BXP8 1791 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 RTL9Q8NET4 1388 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 ITGA6P23229 1130 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 FGD1P98174 961 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 PUM3Q15397 648 aaKnown RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 TRAPPC3LQ5T215 181 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 CWC27Q6UX04 472 aaKnown RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 EAF2Q96CJ1 260 aaPredicted RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 NLRP3Q96P20 1036 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 TM6SF1Q9BZW5 370 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 ANKRD2Q9GZV1 360 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 BOLA2Q9H3K6 86 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 QTRT2Q9H974 415 aaKnown RBP7.22□□□□□ -1.25
CYLD-216ENST00000569891 SASH1O94885 1247 aa7.22□□□□□ -1.25
CYLD-216ENST00000569891 RFX5P48382 616 aaPredicted RBP7.21□□□□□ -1.25
CYLD-216ENST00000569891 NEK4P51957 841 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 ANKRD18AQ8IVF6 992 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 KBTBD3Q8NAB2 608 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 LPIN2Q92539 896 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 FAM89AQ96GI7 184 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 NARFQ9UHQ1 456 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 TAF1P21675 1872 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 BCL9LQ86UU0 1499 aa7.21□□□□□ -1.25
CYLD-216ENST00000569891 MCMDC2Q4G0Z9 681 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 PAG1Q9NWQ8 432 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 DLEC1Q9Y238 1755 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 A0A1B0GUL7 405 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 SSFA2P28290 1259 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 HSPA1LP34931 641 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 CAVIN4Q5BKX8 364 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 NBPF5PQ86XG9 351 aaPredicted RBP7.21□□□□□ -1.26
CYLD-216ENST00000569891 SEPT12Q8IYM1 358 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 ZNF512BQ96KM6 892 aaPredicted RBP7.21□□□□□ -1.26
CYLD-216ENST00000569891 SLKQ9H2G2 1235 aaPredicted RBP7.21□□□□□ -1.26
CYLD-216ENST00000569891 RBM6P78332 1123 aaKnown RBP7.21□□□□□ -1.26
CYLD-216ENST00000569891 VPS37DQ86XT2 251 aa7.21□□□□□ -1.26
CYLD-216ENST00000569891 INTS4Q96HW7 963 aaKnown RBP7.21□□□□□ -1.26
CYLD-216ENST00000569891 MSH5O43196 834 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 HSPA4P34932 840 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 ST5P78524 1137 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 KRT27Q7Z3Y8 459 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 KAZALD1Q96I82 304 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 CCDC171Q6TFL3 1326 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 ATRNO75882 1429 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 GNPATO15228 680 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 PDCP20941 246 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 MAP3K12Q12852 859 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 DDX46Q7L014 1031 aaKnown RBP7.2□□□□□ -1.26
CYLD-216ENST00000569891 TTLL11Q8NHH1 800 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 MYO5AQ9Y4I1 1855 aaKnown RBP7.2□□□□□ -1.26
CYLD-216ENST00000569891 ONECUT3O60422 494 aaPredicted RBP7.2□□□□□ -1.26
CYLD-216ENST00000569891 TRDNQ13061 729 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms