RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 ATG3Q9NT62 314 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 TOR4AQ9NXH8 423 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 CASZ1Q86V15 1759 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 QSER1Q2KHR3 1735 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 PAPPAQ13219 1627 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 KDM6AO15550 1401 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-219ENST00000569882 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
CNOT1-219ENST00000569882 NPHP1O15259 732 aa6.34□□□□□ -1.39
CNOT1-219ENST00000569882 ANP32CO43423 234 aa6.34□□□□□ -1.39
CNOT1-219ENST00000569882 JUNDP17535 347 aa6.34□□□□□ -1.39
CNOT1-219ENST00000569882 PTCRAQ6ISU1 281 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-219ENST00000569882 RETREG3Q86VR2 466 aa6.34□□□□□ -1.39
CNOT1-219ENST00000569882 TBC1D2Q9BYX2 928 aa6.34□□□□□ -1.39
CNOT1-219ENST00000569882 PDGFDQ9GZP0 370 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-219ENST00000569882 COL3A1P02461 1466 aaPredicted RBP6.34□□□□□ -1.4
CNOT1-219ENST00000569882 BTBD11A6QL63 1104 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 STARD3NLO95772 234 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 SSFA2P28290 1259 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 SLC39A6Q13433 755 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 CTC1Q2NKJ3 1217 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 TRAPPC3LQ5T215 181 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 FHDC1Q9C0D6 1143 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-219ENST00000569882 RSPH6AQ9H0K4 717 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 LGR6Q9HBX8 967 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 PCDHB15Q9Y5E8 787 aa6.33□□□□□ -1.4
CNOT1-219ENST00000569882 UBR3Q6ZT12 1888 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 CRKLP46109 303 aaKnown RBP6.32□□□□□ -1.4
CNOT1-219ENST00000569882 SKOR1P84550 965 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 PDE4DQ08499 809 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 LMOD3Q0VAK6 560 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 NEUROD2Q15784 382 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 GPR162Q16538 588 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 MCM10Q7L590 875 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 COL23A1Q86Y22 540 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-219ENST00000569882 CYP4X1Q8N118 509 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 MRGPRX2Q96LB1 330 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 FMNL2Q96PY5 1086 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 DLG5Q8TDM6 1919 aa6.32□□□□□ -1.4
CNOT1-219ENST00000569882 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 WNT7AO00755 349 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
CNOT1-219ENST00000569882 ITPK1Q13572 414 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 RSBN1LQ6PCB5 846 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-219ENST00000569882 CCDC146Q8IYE0 955 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 PRR7Q8TB68 274 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 PHACTR3Q96KR7 559 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 TEX13AQ9BXU3 409 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-219ENST00000569882 CCDC87Q9NVE4 849 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
CNOT1-219ENST00000569882 COL5A3P25940 1745 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 ZNF831Q5JPB2 1677 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 MRC1P22897 1456 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 HTATSF1O43719 755 aaKnown RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 RPS6KA4O75676 772 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 RIPK4P57078 832 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 MTMR2Q13614 643 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 DCTN1Q14203 1278 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 RC3H1Q5TC82 1133 aaKnown RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 ZNF790Q6PG37 636 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 DNAJC10Q8IXB1 793 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 NLGN1Q8N2Q7 840 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 KCTD17Q8N5Z5 321 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 SYT17Q9BSW7 474 aa6.3□□□□□ -1.4
CNOT1-219ENST00000569882 PRKRIP1Q9H875 184 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 LAS1LQ9Y4W2 734 aaKnown RBP6.3□□□□□ -1.4
CNOT1-219ENST00000569882 A0A087WZG4 1122 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 J3QL48 77 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 MMP10P09238 476 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 CCNYL3P0C7X3 344 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 SMPD1P17405 629 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 TJP1Q07157 1748 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 TAF7Q15545 349 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-219ENST00000569882 CSPP1Q1MSJ5 1256 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 SMIM5Q71RC9 77 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 HOMEZQ8IX15 550 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 IL17REQ8NFR9 667 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 MRS2Q9HD23 443 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 TSPYL4Q9UJ04 414 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 RRP7AQ9Y3A4 280 aaKnown RBP6.29□□□□□ -1.4
CNOT1-219ENST00000569882 COL15A1P39059 1388 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 UBR2Q8IWV8 1755 aa6.29□□□□□ -1.4
CNOT1-219ENST00000569882 C4AP0C0L4 1744 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 MYH14Q7Z406 1995 aaKnown RBP6.28□□□□□ -1.4
CNOT1-219ENST00000569882 CFAP99D6REC4 459 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 SPTLC1O15269 473 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 AVPP01185 164 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 SNRPA1P09661 255 aaKnown RBP6.28□□□□□ -1.4
CNOT1-219ENST00000569882 YY1P25490 414 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 BICDL1Q6ZP65 573 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 RIC3Q7Z5B4 369 aa6.28□□□□□ -1.4
CNOT1-219ENST00000569882 SNIP1Q8TAD8 396 aaKnown RBP6.28□□□□□ -1.4
CNOT1-219ENST00000569882 RUNDC1Q96C34 613 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms