RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 GPR101Q96P66 508 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-215ENST00000568477 PLA2G12BQ9BX93 195 aa18.38■□□□□ 0.53
CMTM3-215ENST00000568477 GREM2Q9H772 168 aa18.38■□□□□ 0.53
CMTM3-215ENST00000568477 DBNDD1Q9H9R9 158 aa18.38■□□□□ 0.53
CMTM3-215ENST00000568477 ADARB2Q9NS39 739 aaKnown RBP18.38■□□□□ 0.53
CMTM3-215ENST00000568477 MYH3P11055 1940 aa18.38■□□□□ 0.53
CMTM3-215ENST00000568477 F6X3S4 739 aa18.37■□□□□ 0.53
CMTM3-215ENST00000568477 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
CMTM3-215ENST00000568477 XDHP47989 1333 aa18.37■□□□□ 0.53
CMTM3-215ENST00000568477 E9PSI1 815 aa18.36■□□□□ 0.53
CMTM3-215ENST00000568477 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
CMTM3-215ENST00000568477 ECE2O60344 883 aa18.36■□□□□ 0.53
CMTM3-215ENST00000568477 CASP7P55210 303 aa18.36■□□□□ 0.53
CMTM3-215ENST00000568477 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
CMTM3-215ENST00000568477 G3V3G9 751 aa18.35■□□□□ 0.53
CMTM3-215ENST00000568477 BEND3Q5T5X7 828 aa18.35■□□□□ 0.53
CMTM3-215ENST00000568477 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
CMTM3-215ENST00000568477 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
CMTM3-215ENST00000568477 TMEM88BA6NKF7 163 aa18.34■□□□□ 0.53
CMTM3-215ENST00000568477 PSMD14O00487 310 aa18.34■□□□□ 0.53
CMTM3-215ENST00000568477 ATP2B4P23634 1241 aa18.34■□□□□ 0.53
CMTM3-215ENST00000568477 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
CMTM3-215ENST00000568477 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
CMTM3-215ENST00000568477 H7C1D1 291 aa18.33■□□□□ 0.52
CMTM3-215ENST00000568477 ITGA6P23229 1130 aa18.33■□□□□ 0.52
CMTM3-215ENST00000568477 CNOT7Q9UIV1 285 aaKnown RBP18.33■□□□□ 0.52
CMTM3-215ENST00000568477 MINPP1Q9UNW1 487 aa18.33■□□□□ 0.52
CMTM3-215ENST00000568477 CSF1RP07333 972 aa18.32■□□□□ 0.52
CMTM3-215ENST00000568477 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
CMTM3-215ENST00000568477 MICALL2Q8IY33 904 aa18.32■□□□□ 0.52
CMTM3-215ENST00000568477 DPF2Q92785 391 aa18.32■□□□□ 0.52
CMTM3-215ENST00000568477 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
CMTM3-215ENST00000568477 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-215ENST00000568477 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
CMTM3-215ENST00000568477 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
CMTM3-215ENST00000568477 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
CMTM3-215ENST00000568477 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
CMTM3-215ENST00000568477 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 GRM8O00222 908 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 MPHOSPH8Q99549 860 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 SRCIN1Q9C0H9 1055 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
CMTM3-215ENST00000568477 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
CMTM3-215ENST00000568477 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
CMTM3-215ENST00000568477 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
CMTM3-215ENST00000568477 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
CMTM3-215ENST00000568477 ANKRD2Q9GZV1 360 aa18.29■□□□□ 0.52
CMTM3-215ENST00000568477 C9orf78Q9NZ63 289 aaPredicted RBP18.29■□□□□ 0.52
CMTM3-215ENST00000568477 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
CMTM3-215ENST00000568477 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
CMTM3-215ENST00000568477 VIL1P09327 827 aaKnown RBP18.28■□□□□ 0.52
CMTM3-215ENST00000568477 HIRAP54198 1017 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-215ENST00000568477 FOXO4P98177 505 aa18.28■□□□□ 0.52
CMTM3-215ENST00000568477 IFIT5Q13325 482 aaKnown RBP18.28■□□□□ 0.52
CMTM3-215ENST00000568477 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
CMTM3-215ENST00000568477 PGAP2Q9UHJ9 254 aa18.28■□□□□ 0.52
CMTM3-215ENST00000568477 LEMD3Q9Y2U8 911 aa18.28■□□□□ 0.52
CMTM3-215ENST00000568477 PTPRCP08575 1304 aa18.27■□□□□ 0.52
CMTM3-215ENST00000568477 TRAF5O00463 557 aa18.27■□□□□ 0.52
CMTM3-215ENST00000568477 PODNQ7Z5L7 613 aa18.27■□□□□ 0.52
CMTM3-215ENST00000568477 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
CMTM3-215ENST00000568477 ABT1Q9ULW3 272 aaKnown RBP18.27■□□□□ 0.52
CMTM3-215ENST00000568477 WTIPA6NIX2 430 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-215ENST00000568477 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
CMTM3-215ENST00000568477 TBC1D10BQ4KMP7 808 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-215ENST00000568477 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-215ENST00000568477 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
CMTM3-215ENST00000568477 SAMD7Q7Z3H4 446 aa18.26■□□□□ 0.51
CMTM3-215ENST00000568477 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-215ENST00000568477 ZNF804BA4D1E1 1349 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 ZNF609O15014 1411 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 USP17L3A6NCW0 530 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 USP17L4A6NCW7 530 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 RASSF10A6NK89 507 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 CHRNDQ07001 517 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 USP17L1Q7RTZ2 530 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 AGBL3Q8NEM8 1001 aa18.25■□□□□ 0.51
CMTM3-215ENST00000568477 HSPA1AP0DMV8 641 aaKnown RBP18.24■□□□□ 0.51
CMTM3-215ENST00000568477 HSPA1BP0DMV9 641 aaKnown RBP18.24■□□□□ 0.51
CMTM3-215ENST00000568477 KCNJ4P48050 445 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 VEGFBP49765 207 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 CCDC57Q2TAC2 916 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 ALDH1L2Q3SY69 923 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 TAF7LQ5H9L4 462 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
CMTM3-215ENST00000568477 MIER1Q8N108 512 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 TRPM7Q96QT4 1865 aa18.24■□□□□ 0.51
CMTM3-215ENST00000568477 EGFRP00533 1210 aa18.23■□□□□ 0.51
CMTM3-215ENST00000568477 KIF4BQ2VIQ3 1234 aa18.23■□□□□ 0.51
CMTM3-215ENST00000568477 RBM26Q5T8P6 1007 aaKnown RBP18.23■□□□□ 0.51
CMTM3-215ENST00000568477 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
CMTM3-215ENST00000568477 PSME4Q14997 1843 aa18.23■□□□□ 0.51
CMTM3-215ENST00000568477 CELF2O95319 508 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms