RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 EYA3Q99504 573 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 CEP290O15078 2479 aa12.75□□□□□ -0.37
KARS-209ENST00000568378 PRAMEF18Q5VWM3 479 aa12.75□□□□□ -0.37
KARS-209ENST00000568378 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
KARS-209ENST00000568378 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
KARS-209ENST00000568378 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
KARS-209ENST00000568378 CENPFP49454 3210 aa12.75□□□□□ -0.37
KARS-209ENST00000568378 LAMB2P55268 1798 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 VIL1P09327 827 aaKnown RBP12.74□□□□□ -0.37
KARS-209ENST00000568378 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
KARS-209ENST00000568378 ZNF280AP59817 542 aaPredicted RBP12.74□□□□□ -0.37
KARS-209ENST00000568378 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 CD99L2Q8TCZ2 262 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 EFCC1Q9HA90 598 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
KARS-209ENST00000568378 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
KARS-209ENST00000568378 ZNF609O15014 1411 aa12.73□□□□□ -0.37
KARS-209ENST00000568378 BRCA2P51587 3418 aa12.73□□□□□ -0.37
KARS-209ENST00000568378 TAF7Q15545 349 aaPredicted RBP12.73□□□□□ -0.37
KARS-209ENST00000568378 MYOZ2Q9NPC6 264 aa12.73□□□□□ -0.37
KARS-209ENST00000568378 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
KARS-209ENST00000568378 POLLQ9UGP5 575 aa12.73□□□□□ -0.37
KARS-209ENST00000568378 A0A0C4DFX4 3053 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
KARS-209ENST00000568378 GPSM2P81274 684 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
KARS-209ENST00000568378 PRKG1Q13976 671 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
KARS-209ENST00000568378 ARMC9Q7Z3E5 817 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 AGBL3Q8NEM8 1001 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 ZC3H12CQ9C0D7 883 aaKnown RBP12.72□□□□□ -0.37
KARS-209ENST00000568378 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
KARS-209ENST00000568378 TAF1P21675 1872 aa12.72□□□□□ -0.37
KARS-209ENST00000568378 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
KARS-209ENST00000568378 INHBEP58166 350 aa12.71□□□□□ -0.37
KARS-209ENST00000568378 SLC9C1Q4G0N8 1177 aa12.71□□□□□ -0.37
KARS-209ENST00000568378 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
KARS-209ENST00000568378 DPF3Q92784 378 aa12.71□□□□□ -0.37
KARS-209ENST00000568378 ZNF333Q96JL9 665 aa12.71□□□□□ -0.37
KARS-209ENST00000568378 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
KARS-209ENST00000568378 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
KARS-209ENST00000568378 SH3TC1Q8TE82 1336 aa12.7□□□□□ -0.38
KARS-209ENST00000568378 MYCP01106 439 aaPredicted RBP12.7□□□□□ -0.38
KARS-209ENST00000568378 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
KARS-209ENST00000568378 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
KARS-209ENST00000568378 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
KARS-209ENST00000568378 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
KARS-209ENST00000568378 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
KARS-209ENST00000568378 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
KARS-209ENST00000568378 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
KARS-209ENST00000568378 CELF1Q92879 486 aaKnown RBP12.69□□□□□ -0.38
KARS-209ENST00000568378 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
KARS-209ENST00000568378 COL6A3P12111 3177 aa12.68□□□□□ -0.38
KARS-209ENST00000568378 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
KARS-209ENST00000568378 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
KARS-209ENST00000568378 SP3Q02447 781 aa12.68□□□□□ -0.38
KARS-209ENST00000568378 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
KARS-209ENST00000568378 OTUD7BQ6GQQ9 843 aa12.68□□□□□ -0.38
KARS-209ENST00000568378 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
KARS-209ENST00000568378 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
KARS-209ENST00000568378 ANGEL1Q9UNK9 670 aaKnown RBP12.68□□□□□ -0.38
KARS-209ENST00000568378 IGF2BP3O00425 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
KARS-209ENST00000568378 UFL1O94874 794 aa12.67□□□□□ -0.38
KARS-209ENST00000568378 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
KARS-209ENST00000568378 CRHR2Q13324 411 aa12.67□□□□□ -0.38
KARS-209ENST00000568378 ARHGEF6Q15052 776 aa12.67□□□□□ -0.38
KARS-209ENST00000568378 NBPF9Q3BBW0 867 aa12.67□□□□□ -0.38
KARS-209ENST00000568378 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
KARS-209ENST00000568378 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
KARS-209ENST00000568378 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
KARS-209ENST00000568378 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
KARS-209ENST00000568378 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
KARS-209ENST00000568378 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
KARS-209ENST00000568378 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
KARS-209ENST00000568378 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
KARS-209ENST00000568378 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
KARS-209ENST00000568378 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
KARS-209ENST00000568378 OGFOD1Q8N543 542 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 ZNF428Q96B54 188 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 CFAP53Q96M91 514 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 GMLQ99445 158 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 NUDCQ9Y266 331 aa12.65□□□□□ -0.38
KARS-209ENST00000568378 USP17L3A6NCW0 530 aa12.64□□□□□ -0.39
KARS-209ENST00000568378 USP17L4A6NCW7 530 aa12.64□□□□□ -0.39
KARS-209ENST00000568378 WTIPA6NIX2 430 aaPredicted RBP12.64□□□□□ -0.39
KARS-209ENST00000568378 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
KARS-209ENST00000568378 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
KARS-209ENST00000568378 USP17L1Q7RTZ2 530 aa12.64□□□□□ -0.39
KARS-209ENST00000568378 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
KARS-209ENST00000568378 WNT10BO00744 389 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms