RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 MX1P20591 662 aa12.76□□□□□ -0.37
CDH11-214ENST00000568340 GRAPQ13588 217 aa12.76□□□□□ -0.37
CDH11-214ENST00000568340 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
CDH11-214ENST00000568340 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
CDH11-214ENST00000568340 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
CDH11-214ENST00000568340 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
CDH11-214ENST00000568340 SRGNP10124 158 aa12.75□□□□□ -0.37
CDH11-214ENST00000568340 PTGER2P43116 358 aa12.75□□□□□ -0.37
CDH11-214ENST00000568340 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
CDH11-214ENST00000568340 TTC22Q5TAA0 569 aa12.75□□□□□ -0.37
CDH11-214ENST00000568340 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
CDH11-214ENST00000568340 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
CDH11-214ENST00000568340 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
CDH11-214ENST00000568340 TTC41PQ6P2S7 1318 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 PDE8BO95263 885 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
CDH11-214ENST00000568340 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
CDH11-214ENST00000568340 AACSQ86V21 672 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
CDH11-214ENST00000568340 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
CDH11-214ENST00000568340 ADORA1P30542 326 aa12.73□□□□□ -0.37
CDH11-214ENST00000568340 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
CDH11-214ENST00000568340 CHRNDQ07001 517 aa12.73□□□□□ -0.37
CDH11-214ENST00000568340 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
CDH11-214ENST00000568340 CCDC8Q9H0W5 538 aaPredicted RBP12.73□□□□□ -0.37
CDH11-214ENST00000568340 MINPP1Q9UNW1 487 aa12.73□□□□□ -0.37
CDH11-214ENST00000568340 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
CDH11-214ENST00000568340 A0A1B0GUL7 405 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 WTIPA6NIX2 430 aaPredicted RBP12.72□□□□□ -0.37
CDH11-214ENST00000568340 SNAP23O00161 211 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 ZBTB22O15209 634 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
CDH11-214ENST00000568340 TAF7LQ5H9L4 462 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
CDH11-214ENST00000568340 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
CDH11-214ENST00000568340 ZNF804BA4D1E1 1349 aa12.71□□□□□ -0.37
CDH11-214ENST00000568340 NPR1P16066 1061 aa12.71□□□□□ -0.37
CDH11-214ENST00000568340 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
CDH11-214ENST00000568340 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
CDH11-214ENST00000568340 ECHDC1Q9NTX5 307 aa12.71□□□□□ -0.37
CDH11-214ENST00000568340 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.37
CDH11-214ENST00000568340 KCNA3P22001 575 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 PDE6BP35913 854 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 TIMM10P62072 90 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
CDH11-214ENST00000568340 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
CDH11-214ENST00000568340 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
CDH11-214ENST00000568340 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 AKAP11Q9UKA4 1901 aa12.7□□□□□ -0.38
CDH11-214ENST00000568340 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 TAF5LO75529 589 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 GLRX3O76003 335 aaKnown RBP12.69□□□□□ -0.38
CDH11-214ENST00000568340 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
CDH11-214ENST00000568340 ATP5JP18859 108 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 SDSP20132 328 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 KLRK1P26718 216 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 CHRNA5P30532 468 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDH11-214ENST00000568340 LPIN2Q92539 896 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
CDH11-214ENST00000568340 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 RBM17Q96I25 401 aaKnown RBP12.69□□□□□ -0.38
CDH11-214ENST00000568340 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
CDH11-214ENST00000568340 BBOX1O75936 387 aa12.68□□□□□ -0.38
CDH11-214ENST00000568340 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
CDH11-214ENST00000568340 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
CDH11-214ENST00000568340 SCARF1Q14162 830 aa12.68□□□□□ -0.38
CDH11-214ENST00000568340 C15orf52Q6ZUT6 534 aaKnown RBP12.68□□□□□ -0.38
CDH11-214ENST00000568340 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
CDH11-214ENST00000568340 BACH2Q9BYV9 841 aa12.68□□□□□ -0.38
CDH11-214ENST00000568340 NPHP1O15259 732 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 PHKA1P46020 1223 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 GPSM2P81274 684 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 HAUS7Q99871 368 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
CDH11-214ENST00000568340 ATP6V0A2Q9Y487 856 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 RFX7Q2KHR2 1363 aa12.67□□□□□ -0.38
CDH11-214ENST00000568340 ZNF646O15015 1829 aaPredicted RBP12.67□□□□□ -0.38
CDH11-214ENST00000568340 XDHP47989 1333 aa12.66□□□□□ -0.38
CDH11-214ENST00000568340 CACNA1SQ13698 1873 aa12.66□□□□□ -0.38
CDH11-214ENST00000568340 PPEF1O14829 653 aaPredicted RBP12.66□□□□□ -0.38
CDH11-214ENST00000568340 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
CDH11-214ENST00000568340 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
CDH11-214ENST00000568340 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
CDH11-214ENST00000568340 DOCK2Q92608 1830 aa12.66□□□□□ -0.38
CDH11-214ENST00000568340 YY1P25490 414 aa12.65□□□□□ -0.38
CDH11-214ENST00000568340 MCAMP43121 646 aa12.65□□□□□ -0.38
CDH11-214ENST00000568340 CCDC102BQ68D86 513 aa12.65□□□□□ -0.38
CDH11-214ENST00000568340 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms