RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SAP130Q9H0E3 1048 aa7.9□□□□□ -1.14
CAPN3-217ENST00000567817 ZFYVE16Q7Z3T8 1539 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 ELOA3CA0A087WX78 387 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-217ENST00000567817 ELOA3DA6NLF2 546 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-217ENST00000567817 ADARB2-AS1A8MUL3 147 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 PHF20L1A8MW92 1017 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 AMPD1P23109 780 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 ELOA3BQ3SY89 546 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 CAPN12Q6ZSI9 719 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 TREML1Q86YW5 311 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-217ENST00000567817 ELOA3Q8NG57 546 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 BTBD6Q96KE9 485 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 RICTORQ6R327 1708 aa7.89□□□□□ -1.15
CAPN3-217ENST00000567817 ARHGEF12Q9NZN5 1544 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 TNFRSF10BO14763 440 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 SSFA2P28290 1259 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
CAPN3-217ENST00000567817 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 CHSY3Q70JA7 882 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-217ENST00000567817 BHMTQ93088 406 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 GSX2Q9BZM3 304 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 MKL2Q9ULH7 1088 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 STRCQ7RTU9 1775 aa7.88□□□□□ -1.15
CAPN3-217ENST00000567817 SETD1BQ9UPS6 1966 aaKnown RBP7.88□□□□□ -1.15
CAPN3-217ENST00000567817 CTTNBP2Q8WZ74 1663 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 CCINQ13939 588 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 NAA30Q147X3 362 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-217ENST00000567817 ABTB2Q8N961 1025 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 PNMA5Q96PV4 448 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 RRAGCQ9HB90 399 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 LTBP4Q8N2S1 1624 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 ATP10BO94823 1461 aa7.87□□□□□ -1.15
CAPN3-217ENST00000567817 CNTNAP5Q8WYK1 1306 aa7.86□□□□□ -1.15
CAPN3-217ENST00000567817 OPLAHO14841 1288 aa7.86□□□□□ -1.15
CAPN3-217ENST00000567817 HOXB4P17483 251 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-217ENST00000567817 ALAS2P22557 587 aa7.86□□□□□ -1.15
CAPN3-217ENST00000567817 DGKGP49619 791 aa7.86□□□□□ -1.15
CAPN3-217ENST00000567817 GSK3AP49840 483 aa7.86□□□□□ -1.15
CAPN3-217ENST00000567817 SNRPNP63162 240 aaKnown RBP7.86□□□□□ -1.15
CAPN3-217ENST00000567817 ETFBKMTQ8IXQ9 262 aa7.86□□□□□ -1.15
CAPN3-217ENST00000567817 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-217ENST00000567817 PIK3R2O00459 728 aa7.85□□□□□ -1.15
CAPN3-217ENST00000567817 IRS1P35568 1242 aa7.85□□□□□ -1.15
CAPN3-217ENST00000567817 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
CAPN3-217ENST00000567817 FAM13BQ9NYF5 915 aa7.85□□□□□ -1.15
CAPN3-217ENST00000567817 STIM2Q9P246 746 aa7.85□□□□□ -1.15
CAPN3-217ENST00000567817 SEPT3Q9UH03 358 aa7.85□□□□□ -1.15
CAPN3-217ENST00000567817 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
CAPN3-217ENST00000567817 EGFRP00533 1210 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 NFKB1P19838 968 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 ADH7P40394 386 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 RASSF7Q02833 373 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 RGL4Q8IZJ4 473 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 HELQQ8TDG4 1101 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 C9orf84Q5VXU9 1444 aa7.84□□□□□ -1.15
CAPN3-217ENST00000567817 MAP3K6O95382 1288 aa7.83□□□□□ -1.16
CAPN3-217ENST00000567817 FAM26DQ5JW98 314 aa7.83□□□□□ -1.16
CAPN3-217ENST00000567817 UBE2OQ9C0C9 1292 aaKnown RBP7.83□□□□□ -1.16
CAPN3-217ENST00000567817 ATP10AO60312 1499 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 CARNS1A5YM72 827 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 GNB5O14775 395 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 CLIP1P30622 1438 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 ZAP70P43403 619 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 PDE4CQ08493 712 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 MED1Q15648 1581 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-217ENST00000567817 NCOA1Q15788 1441 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 LINC00114Q6XXX2 140 aa7.82□□□□□ -1.16
CAPN3-217ENST00000567817 CMTR1Q8N1G2 835 aaKnown RBP7.82□□□□□ -1.16
CAPN3-217ENST00000567817 VPS8Q8N3P4 1428 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 XYLBO75191 536 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 GDF11O95390 407 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 PCSK7Q16549 785 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 PHLDB3Q6NSJ2 640 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
CAPN3-217ENST00000567817 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 RETREG2Q8NC44 543 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 PIK3R5Q8WYR1 880 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 SLC6A14Q9UN76 642 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 KCNMB2Q9Y691 235 aa7.81□□□□□ -1.16
CAPN3-217ENST00000567817 UBAP1LF5GYI3 381 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 RARAP10276 462 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 SCNN1AP37088 669 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 TBC1D8BQ0IIM8 1120 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 KRT25Q7Z3Z0 450 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 GTF3C2Q8WUA4 911 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-217ENST00000567817 PRDM6Q9NQX0 595 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 DNAJB12Q9NXW2 375 aaKnown RBP7.8□□□□□ -1.16
CAPN3-217ENST00000567817 NOP53Q9NZM5 478 aaKnown RBP7.8□□□□□ -1.16
CAPN3-217ENST00000567817 ZFATQ9P243 1243 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 HECW1Q76N89 1606 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 PRXQ9BXM0 1461 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 REREQ9P2R6 1566 aa7.8□□□□□ -1.16
CAPN3-217ENST00000567817 TRAPPC8Q9Y2L5 1435 aa7.79□□□□□ -1.16
CAPN3-217ENST00000567817 RAPGEF6Q8TEU7 1601 aa7.79□□□□□ -1.16
CAPN3-217ENST00000567817 SIGLEC1Q9BZZ2 1709 aa7.79□□□□□ -1.16
CAPN3-217ENST00000567817 SASH3O75995 380 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms