RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 DOK7Q18PE1 504 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 SLC4A10Q6U841 1118 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 USP50Q70EL3 339 aaPredicted RBP9.12□□□□□ -0.95
SMPD3-210ENST00000567811 MRPL50Q8N5N7 158 aaKnown RBP9.12□□□□□ -0.95
SMPD3-210ENST00000567811 C9orf78Q9NZ63 289 aaPredicted RBP9.12□□□□□ -0.95
SMPD3-210ENST00000567811 GPRC5DQ9NZD1 345 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 CNOT7Q9UIV1 285 aaKnown RBP9.12□□□□□ -0.95
SMPD3-210ENST00000567811 GGA1Q9UJY5 639 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 MINPP1Q9UNW1 487 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 COL4A5P29400 1685 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 YDJCA8MPS7 323 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 H7C1D1 291 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 ITGA6P23229 1130 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 IGHMBP2P38935 993 aaKnown RBP9.11□□□□□ -0.95
SMPD3-210ENST00000567811 FOXO4P98177 505 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 MIER1Q8N108 512 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 DPF2Q92785 391 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 SRCIN1Q9C0H9 1055 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 DBNDD1Q9H9R9 158 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
SMPD3-210ENST00000567811 ADARB2Q9NS39 739 aaKnown RBP9.11□□□□□ -0.95
SMPD3-210ENST00000567811 XDHP47989 1333 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 GRM8O00222 908 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 PSMD14O00487 310 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 ECE2O60344 883 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 UFL1O94874 794 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 GMPSP49915 693 aaPredicted RBP9.1□□□□□ -0.95
SMPD3-210ENST00000567811 IFIT5Q13325 482 aaKnown RBP9.1□□□□□ -0.95
SMPD3-210ENST00000567811 ALDH1L2Q3SY69 923 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
SMPD3-210ENST00000567811 SSH1Q8WYL5 1049 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
SMPD3-210ENST00000567811 ANKRD2Q9GZV1 360 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 LRRC37AA6NMS7 1700 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 RTL9Q8NET4 1388 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 SPEF2Q9C093 1822 aa9.1□□□□□ -0.95
SMPD3-210ENST00000567811 PASKQ96RG2 1323 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 VIL1P09327 827 aaKnown RBP9.09□□□□□ -0.95
SMPD3-210ENST00000567811 CT47B1P0C2W7 299 aaPredicted RBP9.09□□□□□ -0.95
SMPD3-210ENST00000567811 CCT4P50991 539 aaKnown RBP9.09□□□□□ -0.95
SMPD3-210ENST00000567811 CCDC57Q2TAC2 916 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 LMBR1LQ6UX01 489 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 PODNQ7Z5L7 613 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 ZC3H15Q8WU90 426 aaKnown RBP9.09□□□□□ -0.95
SMPD3-210ENST00000567811 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 PGAP2Q9UHJ9 254 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
SMPD3-210ENST00000567811 CHMP3Q9Y3E7 222 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 COL4A1P02462 1669 aa9.09□□□□□ -0.95
SMPD3-210ENST00000567811 TRPM7Q96QT4 1865 aa9.08□□□□□ -0.96
SMPD3-210ENST00000567811 PTPRCP08575 1304 aa9.08□□□□□ -0.96
SMPD3-210ENST00000567811 WTIPA6NIX2 430 aaPredicted RBP9.08□□□□□ -0.96
SMPD3-210ENST00000567811 TMEM88BA6NKF7 163 aa9.08□□□□□ -0.96
SMPD3-210ENST00000567811 RPS12P25398 132 aaKnown RBP9.08□□□□□ -0.96
SMPD3-210ENST00000567811 HIRAP54198 1017 aaPredicted RBP9.08□□□□□ -0.96
SMPD3-210ENST00000567811 EPHA10Q5JZY3 1008 aa9.08□□□□□ -0.96
SMPD3-210ENST00000567811 SCN9AQ15858 1988 aa9.08□□□□□ -0.96
SMPD3-210ENST00000567811 NBPF7P0C2Y1 421 aaPredicted RBP9.07□□□□□ -0.96
SMPD3-210ENST00000567811 CHRNDQ07001 517 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 FAM161AQ3B820 660 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
SMPD3-210ENST00000567811 LDHAL6AQ6ZMR3 332 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 JMYQ8N9B5 988 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 LTBP1Q14766 1721 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 DUOX1Q9NRD9 1551 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 ADAMTSL1Q8N6G6 1762 aa9.07□□□□□ -0.96
SMPD3-210ENST00000567811 ZNF804BA4D1E1 1349 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 UTYO14607 1347 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 SHTN1A0MZ66 631 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 PLIN1O60240 522 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 TAF5LO75529 589 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 KCNJ4P48050 445 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
SMPD3-210ENST00000567811 DEFB115Q30KQ5 88 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 TAF7LQ5H9L4 462 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 RSBN1LQ6PCB5 846 aaPredicted RBP9.06□□□□□ -0.96
SMPD3-210ENST00000567811 CDC37L1Q7L3B6 337 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 TXNRD3Q86VQ6 643 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 AGBL3Q8NEM8 1001 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
SMPD3-210ENST00000567811 ZNF594Q96JF6 807 aaPredicted RBP9.06□□□□□ -0.96
SMPD3-210ENST00000567811 COA1Q9GZY4 146 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 USP44Q9H0E7 712 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 SMC4Q9NTJ3 1288 aa9.06□□□□□ -0.96
SMPD3-210ENST00000567811 NOB1Q9ULX3 412 aaKnown RBP9.06□□□□□ -0.96
SMPD3-210ENST00000567811 PSME4Q14997 1843 aa9.05□□□□□ -0.96
SMPD3-210ENST00000567811 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMPD3-210ENST00000567811 TBC1D10BQ4KMP7 808 aaPredicted RBP9.05□□□□□ -0.96
SMPD3-210ENST00000567811 CST9Q5W186 159 aa9.05□□□□□ -0.96
SMPD3-210ENST00000567811 TTLL5Q6EMB2 1281 aa9.05□□□□□ -0.96
SMPD3-210ENST00000567811 KAZALD1Q96I82 304 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms