RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 LY75O60449 1722 aa27.93■■■□□ 2.06
LINC00543-201ENST00000567234 A0A0D9SFI3 127 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 TRAK2O60296 914 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 TIMM10P62072 90 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 RASEFQ8IZ41 740 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 UBN2Q6ZU65 1347 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 TRIM37O94972 964 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 KBTBD3Q8NAB2 608 aa27.92■■■□□ 2.06
LINC00543-201ENST00000567234 UPF3BQ9BZI7 483 aaKnown RBP27.92■■■□□ 2.06
LINC00543-201ENST00000567234 BCL11BQ9C0K0 894 aaPredicted RBP27.92■■■□□ 2.06
LINC00543-201ENST00000567234 ANKRD18BA2A2Z9 1011 aa27.9■■■□□ 2.06
LINC00543-201ENST00000567234 SKOR2Q2VWA4 1001 aaPredicted RBP27.9■■■□□ 2.06
LINC00543-201ENST00000567234 PARP10Q53GL7 1025 aa27.9■■■□□ 2.06
LINC00543-201ENST00000567234 SYNE4Q8N205 404 aa27.9■■■□□ 2.06
LINC00543-201ENST00000567234 TTC14Q96N46 770 aa27.9■■■□□ 2.06
LINC00543-201ENST00000567234 DNAJC2Q99543 621 aaKnown RBP27.9■■■□□ 2.06
LINC00543-201ENST00000567234 ZKSCAN1P17029 563 aaPredicted RBP27.9■■■□□ 2.06
LINC00543-201ENST00000567234 EDC3Q96F86 508 aaKnown RBP27.9■■■□□ 2.06
LINC00543-201ENST00000567234 RBM8AQ9Y5S9 174 aaKnown RBP27.9■■■□□ 2.06
LINC00543-201ENST00000567234 CAMTA2O94983 1202 aa27.89■■■□□ 2.06
LINC00543-201ENST00000567234 CYP2E1P05181 493 aaPredicted RBP27.89■■■□□ 2.06
LINC00543-201ENST00000567234 ITGA6P23229 1130 aa27.89■■■□□ 2.06
LINC00543-201ENST00000567234 RIPOR2Q9Y4F9 1068 aa27.89■■■□□ 2.06
LINC00543-201ENST00000567234 PRPF40BQ6NWY9 871 aaKnown RBP27.88■■■□□ 2.05
LINC00543-201ENST00000567234 ILDR1Q86SU0 546 aaPredicted RBP27.88■■■□□ 2.05
LINC00543-201ENST00000567234 LINC00116Q8NCU8 138 aa27.88■■■□□ 2.05
LINC00543-201ENST00000567234 PAG1Q9NWQ8 432 aa27.88■■■□□ 2.05
LINC00543-201ENST00000567234 BCORQ6W2J9 1755 aa27.88■■■□□ 2.05
LINC00543-201ENST00000567234 RNF20Q5VTR2 975 aa27.88■■■□□ 2.05
LINC00543-201ENST00000567234 GREM2Q9H772 168 aa27.88■■■□□ 2.05
LINC00543-201ENST00000567234 ESPNB1AK53 854 aa27.87■■■□□ 2.05
LINC00543-201ENST00000567234 HSP90B1P14625 803 aaKnown RBP27.87■■■□□ 2.05
LINC00543-201ENST00000567234 CREB3L3Q68CJ9 461 aa27.87■■■□□ 2.05
LINC00543-201ENST00000567234 ZGPATQ8N5A5 531 aaKnown RBP27.87■■■□□ 2.05
LINC00543-201ENST00000567234 GRPEL1Q9HAV7 217 aa27.87■■■□□ 2.05
LINC00543-201ENST00000567234 SH3TC1Q8TE82 1336 aa27.87■■■□□ 2.05
LINC00543-201ENST00000567234 ABCC12Q96J65 1359 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 RGL2O15211 777 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 IFIT1P09914 478 aaKnown RBP27.86■■■□□ 2.05
LINC00543-201ENST00000567234 KCNJ4P48050 445 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 CCDC158Q5M9N0 1113 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 ZSWIM6Q9HCJ5 1215 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 HMG20BQ9P0W2 317 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 TAF1LQ8IZX4 1826 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 LAMB2P55268 1798 aa27.86■■■□□ 2.05
LINC00543-201ENST00000567234 TAF5LO75529 589 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 LDHAL6AQ6ZMR3 332 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 RIC1Q4ADV7 1423 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 SSFA2P28290 1259 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 TERF1P54274 439 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 TSGA10IPQ3SY00 556 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 MCMDC2Q4G0Z9 681 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 USPL1Q5W0Q7 1092 aa27.85■■■□□ 2.05
LINC00543-201ENST00000567234 DDX46Q7L014 1031 aaKnown RBP27.85■■■□□ 2.05
LINC00543-201ENST00000567234 CCDC85AQ96PX6 553 aaPredicted RBP27.85■■■□□ 2.05
LINC00543-201ENST00000567234 UTP14AQ9BVJ6 771 aaKnown RBP27.85■■■□□ 2.05
LINC00543-201ENST00000567234 LRP5O75197 1615 aa27.84■■■□□ 2.05
LINC00543-201ENST00000567234 VPS53Q5VIR6 699 aa27.84■■■□□ 2.05
LINC00543-201ENST00000567234 SUSD4Q5VX71 490 aa27.84■■■□□ 2.05
LINC00543-201ENST00000567234 ZNF589Q86UQ0 364 aaPredicted RBP27.84■■■□□ 2.05
LINC00543-201ENST00000567234 XAGE2Q96GT9 111 aa27.84■■■□□ 2.05
LINC00543-201ENST00000567234 CCNL1Q9UK58 526 aaPredicted RBP27.84■■■□□ 2.05
LINC00543-201ENST00000567234 ZNF652Q9Y2D9 606 aa27.84■■■□□ 2.05
LINC00543-201ENST00000567234 SLC27A2O14975 620 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 CASTP20810 708 aaKnown RBP27.83■■■□□ 2.05
LINC00543-201ENST00000567234 PSMA5P28066 241 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 CLEC4GQ6UXB4 293 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 HELLSQ9NRZ9 838 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 GOLIM4O00461 696 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 METTL24Q5JXM2 366 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 LIMCH1Q9UPQ0 1083 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 CYP46A1Q9Y6A2 500 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 NDUFB9Q9Y6M9 179 aa27.83■■■□□ 2.05
LINC00543-201ENST00000567234 RPAP1Q9BWH6 1393 aaPredicted RBP27.82■■■□□ 2.04
LINC00543-201ENST00000567234 LRRFIP1Q32MZ4 808 aaKnown RBP27.82■■■□□ 2.04
LINC00543-201ENST00000567234 GORABQ5T7V8 394 aa27.82■■■□□ 2.04
LINC00543-201ENST00000567234 JAKMIP1Q96N16 626 aaKnown RBP27.82■■■□□ 2.04
LINC00543-201ENST00000567234 CNTNAP4Q9C0A0 1308 aa27.82■■■□□ 2.04
LINC00543-201ENST00000567234 DDX60Q8IY21 1712 aaKnown RBP27.82■■■□□ 2.04
LINC00543-201ENST00000567234 AK2P54819 239 aa27.81■■■□□ 2.04
LINC00543-201ENST00000567234 CNNM1Q9NRU3 951 aa27.81■■■□□ 2.04
LINC00543-201ENST00000567234 ATP2B3Q16720 1220 aa27.81■■■□□ 2.04
LINC00543-201ENST00000567234 TTC39AQ5SRH9 613 aa27.81■■■□□ 2.04
LINC00543-201ENST00000567234 SMIM5Q71RC9 77 aa27.81■■■□□ 2.04
LINC00543-201ENST00000567234 RUFY3Q7L099 469 aa27.81■■■□□ 2.04
LINC00543-201ENST00000567234 ADCK5Q3MIX3 580 aa27.8■■■□□ 2.04
LINC00543-201ENST00000567234 VGLL2Q8N8G2 317 aa27.8■■■□□ 2.04
LINC00543-201ENST00000567234 ZNF512BQ96KM6 892 aaPredicted RBP27.8■■■□□ 2.04
LINC00543-201ENST00000567234 LRRC4BQ9NT99 713 aa27.8■■■□□ 2.04
LINC00543-201ENST00000567234 U3KPZ7 1027 aaPredicted RBP27.8■■■□□ 2.04
LINC00543-201ENST00000567234 RTL9Q8NET4 1388 aa27.8■■■□□ 2.04
LINC00543-201ENST00000567234 GOLGA6L22H0YM25 854 aa27.79■■■□□ 2.04
LINC00543-201ENST00000567234 PDRG1Q9NUG6 133 aa27.79■■■□□ 2.04
LINC00543-201ENST00000567234 ZMYM1Q5SVZ6 1142 aa27.78■■■□□ 2.04
LINC00543-201ENST00000567234 RC3H1Q5TC82 1133 aaKnown RBP27.78■■■□□ 2.04
LINC00543-201ENST00000567234 ZSCAN31Q96LW9 406 aaPredicted RBP27.78■■■□□ 2.04
LINC00543-201ENST00000567234 BAG4O95429 457 aaKnown RBP27.78■■■□□ 2.04
LINC00543-201ENST00000567234 NTSR2O95665 410 aa27.78■■■□□ 2.04
LINC00543-201ENST00000567234 ADORA1P30542 326 aa27.78■■■□□ 2.04
LINC00543-201ENST00000567234 KRT32Q14532 448 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms