RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 RBM26Q5T8P6 1007 aaKnown RBP14.88□□□□□ -0.03
CAPN3-215ENST00000565559 BBOX1O75936 387 aa14.87□□□□□ -0.03
CAPN3-215ENST00000565559 GPTP24298 496 aa14.87□□□□□ -0.03
CAPN3-215ENST00000565559 RPS12P25398 132 aaKnown RBP14.87□□□□□ -0.03
CAPN3-215ENST00000565559 SP8Q8IXZ3 490 aa14.87□□□□□ -0.03
CAPN3-215ENST00000565559 NGEFQ8N5V2 710 aa14.87□□□□□ -0.03
CAPN3-215ENST00000565559 CDCA5Q96FF9 252 aa14.87□□□□□ -0.03
CAPN3-215ENST00000565559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.86□□□□□ -0.03
CAPN3-215ENST00000565559 YDJCA8MPS7 323 aa14.86□□□□□ -0.03
CAPN3-215ENST00000565559 U2SURPO15042 1029 aaKnown RBP14.86□□□□□ -0.03
CAPN3-215ENST00000565559 FKTNO75072 461 aa14.86□□□□□ -0.03
CAPN3-215ENST00000565559 SUSD4Q5VX71 490 aa14.86□□□□□ -0.03
CAPN3-215ENST00000565559 PPP1R42Q7Z4L9 355 aa14.86□□□□□ -0.03
CAPN3-215ENST00000565559 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
CAPN3-215ENST00000565559 ABCC4O15439 1325 aa14.86□□□□□ -0.03
CAPN3-215ENST00000565559 MAP3K15Q6ZN16 1313 aa14.86□□□□□ -0.03
CAPN3-215ENST00000565559 PSMD14O00487 310 aa14.85□□□□□ -0.03
CAPN3-215ENST00000565559 KIF4BQ2VIQ3 1234 aa14.85□□□□□ -0.03
CAPN3-215ENST00000565559 C3orf67Q6ZVT6 689 aa14.85□□□□□ -0.03
CAPN3-215ENST00000565559 GGA3Q9NZ52 723 aa14.85□□□□□ -0.03
CAPN3-215ENST00000565559 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
CAPN3-215ENST00000565559 UBN2Q6ZU65 1347 aa14.85□□□□□ -0.03
CAPN3-215ENST00000565559 NTSR2O95665 410 aa14.84□□□□□ -0.03
CAPN3-215ENST00000565559 EGFRP00533 1210 aa14.84□□□□□ -0.03
CAPN3-215ENST00000565559 SLC17A8Q8NDX2 589 aa14.84□□□□□ -0.03
CAPN3-215ENST00000565559 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
CAPN3-215ENST00000565559 COLQQ9Y215 455 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-215ENST00000565559 POTEFA5A3E0 1075 aa14.83□□□□□ -0.04
CAPN3-215ENST00000565559 SREBF2Q12772 1141 aa14.83□□□□□ -0.04
CAPN3-215ENST00000565559 PARP10Q53GL7 1025 aa14.83□□□□□ -0.04
CAPN3-215ENST00000565559 TM4SF4P48230 202 aa14.82□□□□□ -0.04
CAPN3-215ENST00000565559 WASHC4Q2M389 1173 aa14.82□□□□□ -0.04
CAPN3-215ENST00000565559 ZBTB3Q9H5J0 574 aa14.82□□□□□ -0.04
CAPN3-215ENST00000565559 DDX46Q7L014 1031 aaKnown RBP14.81□□□□□ -0.04
CAPN3-215ENST00000565559 TMC4Q7Z404 712 aa14.81□□□□□ -0.04
CAPN3-215ENST00000565559 ZNF34Q8IZ26 560 aa14.81□□□□□ -0.04
CAPN3-215ENST00000565559 UTP14AQ9BVJ6 771 aaKnown RBP14.81□□□□□ -0.04
CAPN3-215ENST00000565559 DBNDD1Q9H9R9 158 aa14.81□□□□□ -0.04
CAPN3-215ENST00000565559 SLC10A5Q5PT55 438 aa14.8□□□□□ -0.04
CAPN3-215ENST00000565559 TTLL7Q6ZT98 887 aa14.8□□□□□ -0.04
CAPN3-215ENST00000565559 CFHR5Q9BXR6 569 aa14.8□□□□□ -0.04
CAPN3-215ENST00000565559 RRP7AQ9Y3A4 280 aaKnown RBP14.8□□□□□ -0.04
CAPN3-215ENST00000565559 TRIM17Q9Y577 477 aa14.8□□□□□ -0.04
CAPN3-215ENST00000565559 GRAPQ13588 217 aa14.79□□□□□ -0.04
CAPN3-215ENST00000565559 TTLL12Q14166 644 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-215ENST00000565559 ANGEL2Q5VTE6 544 aaKnown RBP14.79□□□□□ -0.04
CAPN3-215ENST00000565559 MCM10Q7L590 875 aa14.79□□□□□ -0.04
CAPN3-215ENST00000565559 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-215ENST00000565559 PAPPA2Q9BXP8 1791 aa14.79□□□□□ -0.04
CAPN3-215ENST00000565559 ALDH1A1P00352 501 aa14.78□□□□□ -0.04
CAPN3-215ENST00000565559 MYL6BP14649 208 aa14.78□□□□□ -0.04
CAPN3-215ENST00000565559 GIGYF2Q6Y7W6 1299 aaKnown RBP14.78□□□□□ -0.04
CAPN3-215ENST00000565559 TAOK2Q9UL54 1235 aa14.78□□□□□ -0.04
CAPN3-215ENST00000565559 UBE2Q2LH0YL09 131 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 ECE2O60344 883 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 PRKAR2BP31323 418 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 TCIRG1Q13488 830 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 SCARF1Q14162 830 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 EYA3Q99504 573 aa14.77□□□□□ -0.05
CAPN3-215ENST00000565559 MKI67P46013 3256 aaKnown RBP14.77□□□□□ -0.05
CAPN3-215ENST00000565559 TRIOBPQ9H2D6 2365 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 NUP98P52948 1817 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 ASTN2O75129 1339 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-215ENST00000565559 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 STK25O00506 426 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 RIMBP2O15034 1052 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 EN2P19622 333 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-215ENST00000565559 NF2P35240 595 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
CAPN3-215ENST00000565559 MKRN3Q13064 507 aaKnown RBP14.76□□□□□ -0.05
CAPN3-215ENST00000565559 MOB2Q70IA6 237 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 OTOP1Q7RTM1 612 aa14.76□□□□□ -0.05
CAPN3-215ENST00000565559 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
CAPN3-215ENST00000565559 CUL9Q8IWT3 2517 aa14.75□□□□□ -0.05
CAPN3-215ENST00000565559 PITPNM2Q9BZ72 1349 aa14.75□□□□□ -0.05
CAPN3-215ENST00000565559 TAF7Q15545 349 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-215ENST00000565559 STK24Q9Y6E0 443 aa14.75□□□□□ -0.05
CAPN3-215ENST00000565559 POLR2AP24928 1970 aaKnown RBP14.74□□□□□ -0.05
CAPN3-215ENST00000565559 RTL9Q8NET4 1388 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 G3V3G9 751 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 ARMC5Q96C12 935 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 ERO1AQ96HE7 468 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 PTPN22Q9Y2R2 807 aa14.74□□□□□ -0.05
CAPN3-215ENST00000565559 DUOX1Q9NRD9 1551 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 H0YGN5 161 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
CAPN3-215ENST00000565559 VIL1P09327 827 aaKnown RBP14.73□□□□□ -0.05
CAPN3-215ENST00000565559 HCLS1P14317 486 aaPredicted RBP14.73□□□□□ -0.05
CAPN3-215ENST00000565559 ZNF280AP59817 542 aaPredicted RBP14.73□□□□□ -0.05
CAPN3-215ENST00000565559 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
CAPN3-215ENST00000565559 SLC39A7Q92504 469 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 NECTIN2Q92692 538 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 R3HDMLQ9H3Y0 253 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 KCNQ5Q9NR82 932 aa14.73□□□□□ -0.05
CAPN3-215ENST00000565559 COL3A1P02461 1466 aaPredicted RBP14.73□□□□□ -0.05
CAPN3-215ENST00000565559 KIAA0100Q14667 2235 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms