RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 LMTK2Q8IWU2 1503 aa6.45□□□□□ -1.38
CAPN3-214ENST00000565274 MADDQ8WXG6 1647 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 CLN3Q13286 438 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 HSP90AA2PQ14568 343 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-214ENST00000565274 ZNF662Q6ZS27 426 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 TAS1R3Q7RTX0 852 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 CACTIN-AS1Q8N1I8 211 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 GJD4Q96KN9 370 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-214ENST00000565274 BACH2Q9BYV9 841 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 NRXN1Q9ULB1 1477 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 IQGAP1P46940 1657 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 ZFYVE16Q7Z3T8 1539 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 SYNMO15061 1565 aa6.44□□□□□ -1.38
CAPN3-214ENST00000565274 ZCCHC11Q5TAX3 1644 aaKnown RBP6.43□□□□□ -1.38
CAPN3-214ENST00000565274 TET3O43151 1660 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-214ENST00000565274 EXOC5O00471 708 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 MAP4K4O95819 1239 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-214ENST00000565274 F11P03951 625 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 ITGB2P05107 769 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 RGS3P49796 1198 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 SETDB1Q15047 1291 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 CLEC4GQ6UXB4 293 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 ARMCX6Q7L4S7 300 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 RRAGCQ9HB90 399 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 ERCC6L2Q5T890 1561 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 EIF3AQ14152 1382 aaKnown RBP6.43□□□□□ -1.38
CAPN3-214ENST00000565274 KANK1Q14678 1352 aa6.43□□□□□ -1.38
CAPN3-214ENST00000565274 GOLIM4O00461 696 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 OIP5O43482 229 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 ADAM23O75077 832 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 RAB11FIP3O75154 756 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 CALRP27797 417 aaKnown RBP6.42□□□□□ -1.38
CAPN3-214ENST00000565274 POLD1P28340 1107 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-214ENST00000565274 PPP2R1AP30153 589 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 RHBDL3P58872 404 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 SNRPNP63162 240 aaKnown RBP6.42□□□□□ -1.38
CAPN3-214ENST00000565274 NR1H3Q13133 447 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 RGL3Q3MIN7 710 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 EXOC6Q8TAG9 804 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 MORC4Q8TE76 937 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 CLUAP1Q96AJ1 413 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 OXCT2Q9BYC2 517 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-214ENST00000565274 INO80Q9ULG1 1556 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-214ENST00000565274 SPHKAPQ2M3C7 1700 aa6.42□□□□□ -1.38
CAPN3-214ENST00000565274 FANCAO15360 1455 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 ASXL1Q8IXJ9 1541 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 ABCA9Q8IUA7 1624 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 A6NJR5 290 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 SPATA31C2B4DYI2 1134 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 SCP2P22307 547 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 CENPCQ03188 943 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 CC2D1BQ5T0F9 858 aaKnown RBP6.41□□□□□ -1.38
CAPN3-214ENST00000565274 CNKSR1Q969H4 720 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 KNSTRNQ9Y448 316 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 NUB1Q9Y5A7 615 aa6.41□□□□□ -1.38
CAPN3-214ENST00000565274 CEP152O94986 1710 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 GOLGA6CA6NDK9 693 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 GOLGA6BA6NDN3 693 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 SHISA8B8ZZ34 492 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 PEX14O75381 377 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 GOLGA6DP0CG33 693 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 MAP2K3P46734 347 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 HSP90AB3PQ58FF7 597 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 WDR44Q5JSH3 913 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 DUSP27Q5VZP5 1158 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 DDX46Q7L014 1031 aaKnown RBP6.4□□□□□ -1.38
CAPN3-214ENST00000565274 DRC1Q96MC2 740 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 MAF1Q9H063 256 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 RUBCNLQ9H714 662 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 GOLGA6AQ9NYA3 693 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 PNMA2Q9UL42 364 aa6.4□□□□□ -1.38
CAPN3-214ENST00000565274 ZNF330Q9Y3S2 320 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-214ENST00000565274 VIRMAQ69YN4 1812 aaKnown RBP6.4□□□□□ -1.38
CAPN3-214ENST00000565274 RPGRIP1LQ68CZ1 1315 aa6.4□□□□□ -1.39
CAPN3-214ENST00000565274 ATP7AQ04656 1500 aa6.4□□□□□ -1.39
CAPN3-214ENST00000565274 SETBP1Q9Y6X0 1596 aa6.4□□□□□ -1.39
CAPN3-214ENST00000565274 CLTCL1P53675 1640 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 MROH1Q8NDA8 1641 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 EPB41L2O43491 1005 aaKnown RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 IL2RAP01589 272 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 PROCP04070 461 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 THBS1P07996 1170 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 SLFN5Q08AF3 891 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 MTA1Q13330 715 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 HDAC1Q13547 482 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 XP32Q5T750 250 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 TMEM214Q6NUQ4 689 aaKnown RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 ANKRD23Q86SG2 305 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 SMC5Q8IY18 1101 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 AFAP1Q8N556 730 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 KLRG1Q96E93 195 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 ZSCAN10Q96SZ4 725 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 ESYT1Q9BSJ8 1104 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 CDCA7Q9BWT1 371 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 MAGEC2Q9UBF1 373 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms