RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DUOX1Q9NRD9 1551 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 NEURL1BA8MQ27 555 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 ECE2O60344 883 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 CTSWP56202 376 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 CST9Q5W186 159 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 TNS4Q8IZW8 715 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 HHIPL1Q96JK4 782 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 BSDC1Q9NW68 430 aaPredicted RBP15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 WBP1LQ9NX94 342 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 XDHP47989 1333 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 WDR33Q9C0J8 1336 aaKnown RBP15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
GTF3C1-204ENST00000564664 VAMP4O75379 141 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 UFL1O94874 794 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 HIRAP54198 1017 aaPredicted RBP15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 FLIIQ13045 1269 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 MICALL2Q8IY33 904 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 PLA2G12BQ9BX93 195 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 TLL2Q9Y6L7 1015 aa15.58■□□□□ 0.08
GTF3C1-204ENST00000564664 CACNA1FO60840 1977 aa15.57■□□□□ 0.08
GTF3C1-204ENST00000564664 DOK7Q18PE1 504 aa15.57■□□□□ 0.08
GTF3C1-204ENST00000564664 PODNQ7Z5L7 613 aa15.57■□□□□ 0.08
GTF3C1-204ENST00000564664 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
GTF3C1-204ENST00000564664 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
GTF3C1-204ENST00000564664 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
GTF3C1-204ENST00000564664 TRAF5O00463 557 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 CELF2O95319 508 aaKnown RBP15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 MAP2K2P36507 400 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 FKBP5Q13451 457 aaPredicted RBP15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 GCKRQ14397 625 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 G2E3Q7L622 706 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 AGBL3Q8NEM8 1001 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 LINS1Q8NG48 757 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 DNAAF4Q8WXU2 420 aa15.56■□□□□ 0.08
GTF3C1-204ENST00000564664 TRPM7Q96QT4 1865 aa15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 FOXN1O15353 648 aa15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 CWF19L2Q2TBE0 894 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 TRPM4Q8TD43 1214 aa15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 CAPNS2Q96L46 248 aa15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 MINPP1Q9UNW1 487 aa15.55■□□□□ 0.08
GTF3C1-204ENST00000564664 CSF1RP07333 972 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 IGHMBP2P38935 993 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 MMP14P50281 582 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 EXOSC9Q06265 439 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 FMR1Q06787 632 aaKnown RBP eCLIP15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 SAMD7Q7Z3H4 446 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 UBE3BQ7Z3V4 1068 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 SAPCD2Q86UD0 394 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 GPR101Q96P66 508 aaPredicted RBP15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 GLIS2Q9BZE0 524 aaPredicted RBP15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 GREM2Q9H772 168 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 KCNQ5Q9NR82 932 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
GTF3C1-204ENST00000564664 ZNF609O15014 1411 aa15.53■□□□□ 0.08
GTF3C1-204ENST00000564664 RSBN1LQ6PCB5 846 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-204ENST00000564664 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-204ENST00000564664 BEGAINQ9BUH8 593 aa15.53■□□□□ 0.08
GTF3C1-204ENST00000564664 ANKRD2Q9GZV1 360 aa15.53■□□□□ 0.08
GTF3C1-204ENST00000564664 USP17L3A6NCW0 530 aa15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 USP17L4A6NCW7 530 aa15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 CASP7P55210 303 aa15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 TBC1D10BQ4KMP7 808 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 PAXIP1Q6ZW49 1069 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 USP17L1Q7RTZ2 530 aa15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 KRT26Q7Z3Y9 468 aa15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 USP48Q86UV5 1035 aa15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-204ENST00000564664 COL4A1P02462 1669 aa15.51■□□□□ 0.07
GTF3C1-204ENST00000564664 SHTN1A0MZ66 631 aa15.51■□□□□ 0.07
GTF3C1-204ENST00000564664 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
GTF3C1-204ENST00000564664 KIF4BQ2VIQ3 1234 aa15.51■□□□□ 0.07
GTF3C1-204ENST00000564664 CYP4F22Q6NT55 531 aa15.51■□□□□ 0.07
GTF3C1-204ENST00000564664 MPHOSPH8Q99549 860 aa15.51■□□□□ 0.07
GTF3C1-204ENST00000564664 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 CA12O43570 354 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 ITGA6P23229 1130 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 RBM26Q5T8P6 1007 aaKnown RBP15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 GMLQ99445 158 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 COA1Q9GZY4 146 aa15.5■□□□□ 0.07
GTF3C1-204ENST00000564664 MYH3P11055 1940 aa15.49■□□□□ 0.07
GTF3C1-204ENST00000564664 ANKRD18BA2A2Z9 1011 aa15.49■□□□□ 0.07
GTF3C1-204ENST00000564664 BEND3Q5T5X7 828 aa15.49■□□□□ 0.07
GTF3C1-204ENST00000564664 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
GTF3C1-204ENST00000564664 C2orf69Q8N8R5 385 aa15.49■□□□□ 0.07
GTF3C1-204ENST00000564664 MYO3BQ8WXR4 1341 aa15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 EGFRP00533 1210 aa15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 HSPA8P11142 646 aaKnown RBP15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 LBX1P52954 281 aa15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 STRIP1Q5VSL9 837 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms