RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 UBR3Q6ZT12 1888 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 SPEF2Q9C093 1822 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 C4AP0C0L4 1744 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 ANAPC15P60006 121 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 TIMM10P62072 90 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 RABEP1Q15276 862 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 ATP2B3Q16720 1220 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
COMMD4-210ENST00000564587 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 GORABQ5T7V8 394 aa18.84■□□□□ 0.61
COMMD4-210ENST00000564587 CARMIL3Q8ND23 1372 aa18.83■□□□□ 0.61
COMMD4-210ENST00000564587 PDE8BO95263 885 aa18.83■□□□□ 0.6
COMMD4-210ENST00000564587 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
COMMD4-210ENST00000564587 ZNF512BQ96KM6 892 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-210ENST00000564587 NLRP3Q96P20 1036 aa18.83■□□□□ 0.6
COMMD4-210ENST00000564587 FSD1Q9BTV5 496 aa18.83■□□□□ 0.6
COMMD4-210ENST00000564587 ANO2Q9NQ90 1003 aa18.83■□□□□ 0.6
COMMD4-210ENST00000564587 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.6
COMMD4-210ENST00000564587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
COMMD4-210ENST00000564587 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
COMMD4-210ENST00000564587 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
COMMD4-210ENST00000564587 PHF14O94880 888 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 APBA3O96018 575 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 IFIT1P09914 478 aaKnown RBP18.81■□□□□ 0.6
COMMD4-210ENST00000564587 PUM3Q15397 648 aaKnown RBP18.81■□□□□ 0.6
COMMD4-210ENST00000564587 TTC39AQ5SRH9 613 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 VGLL2Q8N8G2 317 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 LPIN2Q92539 896 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 SNRKQ9NRH2 765 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-210ENST00000564587 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
COMMD4-210ENST00000564587 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
COMMD4-210ENST00000564587 DEFB132Q7Z7B7 95 aa18.8■□□□□ 0.6
COMMD4-210ENST00000564587 ANKRD18AQ8IVF6 992 aa18.8■□□□□ 0.6
COMMD4-210ENST00000564587 KBTBD3Q8NAB2 608 aa18.8■□□□□ 0.6
COMMD4-210ENST00000564587 IL17RAQ96F46 866 aa18.8■□□□□ 0.6
COMMD4-210ENST00000564587 KIF2CQ99661 725 aa18.8■□□□□ 0.6
COMMD4-210ENST00000564587 NPHP1O15259 732 aa18.79■□□□□ 0.6
COMMD4-210ENST00000564587 UQCRFS1P1P0C7P4 283 aa18.79■□□□□ 0.6
COMMD4-210ENST00000564587 SLC5A1P13866 664 aa18.79■□□□□ 0.6
COMMD4-210ENST00000564587 DNAJC2Q99543 621 aaKnown RBP18.79■□□□□ 0.6
COMMD4-210ENST00000564587 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
COMMD4-210ENST00000564587 PAG1Q9NWQ8 432 aa18.79■□□□□ 0.6
COMMD4-210ENST00000564587 NFIXQ14938 502 aa18.78■□□□□ 0.6
COMMD4-210ENST00000564587 PROM2Q8N271 834 aa18.78■□□□□ 0.6
COMMD4-210ENST00000564587 SEC31BQ9NQW1 1179 aa18.78■□□□□ 0.6
COMMD4-210ENST00000564587 BSDC1Q9NW68 430 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-210ENST00000564587 FGFR2P21802 821 aa18.77■□□□□ 0.6
COMMD4-210ENST00000564587 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
COMMD4-210ENST00000564587 ST18O60284 1047 aa18.76■□□□□ 0.59
COMMD4-210ENST00000564587 GYS1P13807 737 aa18.76■□□□□ 0.59
COMMD4-210ENST00000564587 HSPA4P34932 840 aa18.76■□□□□ 0.59
COMMD4-210ENST00000564587 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-210ENST00000564587 SF3B2Q13435 895 aaKnown RBP18.76■□□□□ 0.59
COMMD4-210ENST00000564587 SMIM5Q71RC9 77 aa18.76■□□□□ 0.59
COMMD4-210ENST00000564587 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
COMMD4-210ENST00000564587 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
COMMD4-210ENST00000564587 ARAP2Q8WZ64 1704 aa18.76■□□□□ 0.59
COMMD4-210ENST00000564587 PSDA5PKW4 1024 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-210ENST00000564587 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-210ENST00000564587 ADORA1P30542 326 aa18.75■□□□□ 0.59
COMMD4-210ENST00000564587 TTF1Q15361 905 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-210ENST00000564587 HELLSQ9NRZ9 838 aa18.75■□□□□ 0.59
COMMD4-210ENST00000564587 GOLIM4O00461 696 aa18.74■□□□□ 0.59
COMMD4-210ENST00000564587 TM4SF1P30408 202 aa18.74■□□□□ 0.59
COMMD4-210ENST00000564587 ST5P78524 1137 aa18.74■□□□□ 0.59
COMMD4-210ENST00000564587 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
COMMD4-210ENST00000564587 NLGN1Q8N2Q7 840 aa18.74■□□□□ 0.59
COMMD4-210ENST00000564587 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
COMMD4-210ENST00000564587 TFCP2L1Q9NZI6 479 aa18.74■□□□□ 0.59
COMMD4-210ENST00000564587 ARID4AP29374 1257 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-210ENST00000564587 MCM2P49736 904 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 RPS8P62241 208 aaKnown RBP18.73■□□□□ 0.59
COMMD4-210ENST00000564587 CHRNDQ07001 517 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 ANKRD2Q9GZV1 360 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 TNS1Q9HBL0 1735 aaKnown RBP18.73■□□□□ 0.59
COMMD4-210ENST00000564587 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 CCDC171Q6TFL3 1326 aa18.73■□□□□ 0.59
COMMD4-210ENST00000564587 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
COMMD4-210ENST00000564587 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
COMMD4-210ENST00000564587 MCMDC2Q4G0Z9 681 aa18.72■□□□□ 0.59
COMMD4-210ENST00000564587 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
COMMD4-210ENST00000564587 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
COMMD4-210ENST00000564587 SERPINB2P05120 415 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 FKBP4Q02790 459 aaKnown RBP eCLIP18.71■□□□□ 0.59
COMMD4-210ENST00000564587 RNF20Q5VTR2 975 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 CCDC102BQ68D86 513 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 C3orf67Q6ZVT6 689 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 MAP4K1Q92918 833 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
COMMD4-210ENST00000564587 FAM227BQ96M60 508 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 IL25Q9H293 177 aa18.71■□□□□ 0.59
COMMD4-210ENST00000564587 A0A0D9SFI3 127 aa18.7■□□□□ 0.58
COMMD4-210ENST00000564587 K7ELQ4 463 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-210ENST00000564587 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
COMMD4-210ENST00000564587 PRR5LQ6MZQ0 368 aa18.7■□□□□ 0.58
COMMD4-210ENST00000564587 HELBQ8NG08 1087 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms