RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 ABT1Q9ULW3 272 aaKnown RBP19.19■□□□□ 0.66
SPG7-210ENST00000564409 COL4A1P02462 1669 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 PCNTO95613 3336 aa19.19■□□□□ 0.66
SPG7-210ENST00000564409 G3V3G9 751 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 PSMD14O00487 310 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 UFL1O94874 794 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 DCAF8Q5TAQ9 597 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 TTLL11Q8NHH1 800 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 XDHP47989 1333 aa19.18■□□□□ 0.66
SPG7-210ENST00000564409 H7C1W4 665 aa19.17■□□□□ 0.66
SPG7-210ENST00000564409 VAMP4O75379 141 aa19.17■□□□□ 0.66
SPG7-210ENST00000564409 ECE1P42892 770 aa19.17■□□□□ 0.66
SPG7-210ENST00000564409 CDC37L1Q7L3B6 337 aa19.17■□□□□ 0.66
SPG7-210ENST00000564409 G2E3Q7L622 706 aa19.17■□□□□ 0.66
SPG7-210ENST00000564409 MICALL2Q8IY33 904 aa19.17■□□□□ 0.66
SPG7-210ENST00000564409 BSDC1Q9NW68 430 aaPredicted RBP19.17■□□□□ 0.66
SPG7-210ENST00000564409 PSME4Q14997 1843 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 ATP2B4P23634 1241 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 FKBP5Q13451 457 aaPredicted RBP19.16■□□□□ 0.66
SPG7-210ENST00000564409 GCKRQ14397 625 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 CWF19L2Q2TBE0 894 aaKnown RBP19.16■□□□□ 0.66
SPG7-210ENST00000564409 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 DNAAF4Q8WXU2 420 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 JARID2Q92833 1246 aaPredicted RBP19.16■□□□□ 0.66
SPG7-210ENST00000564409 AIDAQ96BJ3 306 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 PLA2G12BQ9BX93 195 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 ZNF609O15014 1411 aa19.16■□□□□ 0.66
SPG7-210ENST00000564409 SCN9AQ15858 1988 aa19.15■□□□□ 0.66
SPG7-210ENST00000564409 VIL1P09327 827 aaKnown RBP19.15■□□□□ 0.66
SPG7-210ENST00000564409 HIRAP54198 1017 aaPredicted RBP19.15■□□□□ 0.66
SPG7-210ENST00000564409 MAP2K1Q02750 393 aaPredicted RBP19.15■□□□□ 0.66
SPG7-210ENST00000564409 DOK7Q18PE1 504 aa19.15■□□□□ 0.66
SPG7-210ENST00000564409 CST9Q5W186 159 aa19.15■□□□□ 0.66
SPG7-210ENST00000564409 UBE3BQ7Z3V4 1068 aa19.15■□□□□ 0.66
SPG7-210ENST00000564409 TLL2Q9Y6L7 1015 aa19.15■□□□□ 0.66
SPG7-210ENST00000564409 WDR33Q9C0J8 1336 aaKnown RBP19.15■□□□□ 0.66
SPG7-210ENST00000564409 POLR2AP24928 1970 aaKnown RBP19.14■□□□□ 0.65
SPG7-210ENST00000564409 TRAF5O00463 557 aa19.14■□□□□ 0.65
SPG7-210ENST00000564409 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.65
SPG7-210ENST00000564409 TNS4Q8IZW8 715 aa19.14■□□□□ 0.65
SPG7-210ENST00000564409 TRPM4Q8TD43 1214 aa19.14■□□□□ 0.65
SPG7-210ENST00000564409 HHIPL1Q96JK4 782 aa19.14■□□□□ 0.65
SPG7-210ENST00000564409 CCDC85AQ96PX6 553 aaPredicted RBP19.14■□□□□ 0.65
SPG7-210ENST00000564409 WBP1LQ9NX94 342 aa19.14■□□□□ 0.65
SPG7-210ENST00000564409 ZBTB12Q9Y330 459 aaPredicted RBP19.14■□□□□ 0.65
SPG7-210ENST00000564409 CTCFP49711 727 aaPredicted RBP19.13■□□□□ 0.65
SPG7-210ENST00000564409 PODNQ7Z5L7 613 aa19.13■□□□□ 0.65
SPG7-210ENST00000564409 AGBL3Q8NEM8 1001 aa19.13■□□□□ 0.65
SPG7-210ENST00000564409 GREM2Q9H772 168 aa19.13■□□□□ 0.65
SPG7-210ENST00000564409 PRDM10Q9NQV6 1147 aa19.13■□□□□ 0.65
SPG7-210ENST00000564409 SALL2Q9Y467 1007 aaPredicted RBP19.13■□□□□ 0.65
SPG7-210ENST00000564409 SPEF2Q9C093 1822 aa19.12■□□□□ 0.65
SPG7-210ENST00000564409 CELF2O95319 508 aaKnown RBP19.12■□□□□ 0.65
SPG7-210ENST00000564409 IGHMBP2P38935 993 aaKnown RBP19.12■□□□□ 0.65
SPG7-210ENST00000564409 FAM9BQ8IZU0 186 aa19.12■□□□□ 0.65
SPG7-210ENST00000564409 GLIS2Q9BZE0 524 aaPredicted RBP19.12■□□□□ 0.65
SPG7-210ENST00000564409 MINPP1Q9UNW1 487 aa19.12■□□□□ 0.65
SPG7-210ENST00000564409 THSD7BQ9C0I4 1608 aa19.11■□□□□ 0.65
SPG7-210ENST00000564409 MED23Q9ULK4 1368 aa19.11■□□□□ 0.65
SPG7-210ENST00000564409 FMR1Q06787 632 aaKnown RBP eCLIP19.11■□□□□ 0.65
SPG7-210ENST00000564409 CAPNS2Q96L46 248 aa19.11■□□□□ 0.65
SPG7-210ENST00000564409 GPR101Q96P66 508 aaPredicted RBP19.11■□□□□ 0.65
SPG7-210ENST00000564409 KCNQ5Q9NR82 932 aa19.11■□□□□ 0.65
SPG7-210ENST00000564409 FOXN1O15353 648 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 CSF1RP07333 972 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 MAP2K2P36507 400 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 CASP7P55210 303 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 RSBN1LQ6PCB5 846 aaPredicted RBP19.1■□□□□ 0.65
SPG7-210ENST00000564409 SAMD7Q7Z3H4 446 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 SAPCD2Q86UD0 394 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 DCPSQ96C86 337 aaKnown RBP19.1■□□□□ 0.65
SPG7-210ENST00000564409 ANKRD2Q9GZV1 360 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 LEMD3Q9Y2U8 911 aa19.1■□□□□ 0.65
SPG7-210ENST00000564409 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
SPG7-210ENST00000564409 MMP14P50281 582 aa19.09■□□□□ 0.65
SPG7-210ENST00000564409 CCT4P50991 539 aaKnown RBP19.09■□□□□ 0.65
SPG7-210ENST00000564409 TBC1D10BQ4KMP7 808 aaPredicted RBP19.09■□□□□ 0.65
SPG7-210ENST00000564409 USP17L3A6NCW0 530 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 USP17L4A6NCW7 530 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 ITGA6P23229 1130 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 ZNF280AP59817 542 aaPredicted RBP19.08■□□□□ 0.64
SPG7-210ENST00000564409 KIF4BQ2VIQ3 1234 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 PAXIP1Q6ZW49 1069 aaPredicted RBP19.08■□□□□ 0.64
SPG7-210ENST00000564409 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 KRT26Q7Z3Y9 468 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 MPHOSPH8Q99549 860 aa19.08■□□□□ 0.64
SPG7-210ENST00000564409 USP48Q86UV5 1035 aa19.07■□□□□ 0.64
SPG7-210ENST00000564409 GMLQ99445 158 aa19.07■□□□□ 0.64
SPG7-210ENST00000564409 BEGAINQ9BUH8 593 aa19.07■□□□□ 0.64
SPG7-210ENST00000564409 COA1Q9GZY4 146 aa19.07■□□□□ 0.64
SPG7-210ENST00000564409 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
SPG7-210ENST00000564409 USP17L8P0C7I0 530 aa19.06■□□□□ 0.64
SPG7-210ENST00000564409 BEND3Q5T5X7 828 aa19.06■□□□□ 0.64
SPG7-210ENST00000564409 CYP4F22Q6NT55 531 aa19.06■□□□□ 0.64
SPG7-210ENST00000564409 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
SPG7-210ENST00000564409 ZNF521Q96K83 1311 aa19.05■□□□□ 0.64
SPG7-210ENST00000564409 ANKRD18BA2A2Z9 1011 aa19.05■□□□□ 0.64
SPG7-210ENST00000564409 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms