RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 ABCC4O15439 1325 aa24.61■■□□□ 1.53
SLX1A-204ENST00000563995 SCNN1DP51172 638 aa24.61■■□□□ 1.53
SLX1A-204ENST00000563995 CASP7P55210 303 aa24.61■■□□□ 1.53
SLX1A-204ENST00000563995 EIF6P56537 245 aaKnown RBP24.61■■□□□ 1.53
SLX1A-204ENST00000563995 ABT1Q9ULW3 272 aaKnown RBP24.61■■□□□ 1.53
SLX1A-204ENST00000563995 CCT4P50991 539 aaKnown RBP24.6■■□□□ 1.53
SLX1A-204ENST00000563995 GRIPAP1Q4V328 841 aa24.6■■□□□ 1.53
SLX1A-204ENST00000563995 CRAMP1Q96RY5 1269 aa24.6■■□□□ 1.53
SLX1A-204ENST00000563995 GRM8O00222 908 aa24.59■■□□□ 1.53
SLX1A-204ENST00000563995 PDE8AO60658 829 aa24.59■■□□□ 1.53
SLX1A-204ENST00000563995 SF3B3Q15393 1217 aaKnown RBP24.59■■□□□ 1.53
SLX1A-204ENST00000563995 GJA3Q9Y6H8 435 aa24.59■■□□□ 1.53
SLX1A-204ENST00000563995 PPEF1O14829 653 aaPredicted RBP24.58■■□□□ 1.53
SLX1A-204ENST00000563995 LARGE2Q8N3Y3 721 aa24.58■■□□□ 1.53
SLX1A-204ENST00000563995 RBM17Q96I25 401 aaKnown RBP24.58■■□□□ 1.53
SLX1A-204ENST00000563995 C9orf78Q9NZ63 289 aaPredicted RBP24.58■■□□□ 1.53
SLX1A-204ENST00000563995 TNNQ9UQP3 1299 aa24.58■■□□□ 1.53
SLX1A-204ENST00000563995 TAF1P21675 1872 aa24.58■■□□□ 1.52
SLX1A-204ENST00000563995 PLA2G12BQ9BX93 195 aa24.57■■□□□ 1.52
SLX1A-204ENST00000563995 UTYO14607 1347 aa24.57■■□□□ 1.52
SLX1A-204ENST00000563995 LMOD1P29536 600 aaPredicted RBP24.56■■□□□ 1.52
SLX1A-204ENST00000563995 EPS15P42566 896 aa24.56■■□□□ 1.52
SLX1A-204ENST00000563995 INTS3Q68E01 1043 aaKnown RBP24.56■■□□□ 1.52
SLX1A-204ENST00000563995 MCOLN1Q9GZU1 580 aa24.56■■□□□ 1.52
SLX1A-204ENST00000563995 PDE4DIPQ5VU43 2346 aa24.55■■□□□ 1.52
SLX1A-204ENST00000563995 CTSWP56202 376 aa24.55■■□□□ 1.52
SLX1A-204ENST00000563995 CLUAP1Q96AJ1 413 aa24.55■■□□□ 1.52
SLX1A-204ENST00000563995 FMR1Q06787 632 aaKnown RBP eCLIP24.54■■□□□ 1.52
SLX1A-204ENST00000563995 CCDC152Q4G0S7 254 aa24.54■■□□□ 1.52
SLX1A-204ENST00000563995 DDX46Q7L014 1031 aaKnown RBP24.54■■□□□ 1.52
SLX1A-204ENST00000563995 MYH3P11055 1940 aa24.53■■□□□ 1.52
SLX1A-204ENST00000563995 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
SLX1A-204ENST00000563995 NIM1KQ8IY84 436 aa24.53■■□□□ 1.52
SLX1A-204ENST00000563995 USP44Q9H0E7 712 aa24.53■■□□□ 1.52
SLX1A-204ENST00000563995 LRRC37AA6NMS7 1700 aa24.52■■□□□ 1.52
SLX1A-204ENST00000563995 ECE1P42892 770 aa24.52■■□□□ 1.52
SLX1A-204ENST00000563995 USP50Q70EL3 339 aaPredicted RBP24.52■■□□□ 1.52
SLX1A-204ENST00000563995 FTSJ3Q8IY81 847 aaKnown RBP24.52■■□□□ 1.52
SLX1A-204ENST00000563995 DZIP1LQ8IYY4 767 aaKnown RBP24.52■■□□□ 1.52
SLX1A-204ENST00000563995 TTLL11Q8NHH1 800 aa24.52■■□□□ 1.52
SLX1A-204ENST00000563995 CAPNS2Q96L46 248 aa24.52■■□□□ 1.52
SLX1A-204ENST00000563995 TSKSQ9UJT2 592 aa24.52■■□□□ 1.52
SLX1A-204ENST00000563995 PPIP5K2O43314 1243 aa24.51■■□□□ 1.51
SLX1A-204ENST00000563995 GRAPQ13588 217 aa24.51■■□□□ 1.51
SLX1A-204ENST00000563995 AOC3Q16853 763 aa24.51■■□□□ 1.51
SLX1A-204ENST00000563995 PAXIP1Q6ZW49 1069 aaPredicted RBP24.51■■□□□ 1.51
SLX1A-204ENST00000563995 GRAPLQ8TC17 118 aaPredicted RBP24.51■■□□□ 1.51
SLX1A-204ENST00000563995 ATP6V0A2Q9Y487 856 aa24.51■■□□□ 1.51
SLX1A-204ENST00000563995 FOXO4P98177 505 aa24.5■■□□□ 1.51
SLX1A-204ENST00000563995 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
SLX1A-204ENST00000563995 SUCLG2Q96I99 432 aa24.5■■□□□ 1.51
SLX1A-204ENST00000563995 GPR101Q96P66 508 aaPredicted RBP24.5■■□□□ 1.51
SLX1A-204ENST00000563995 CCDC85AQ96PX6 553 aaPredicted RBP24.5■■□□□ 1.51
SLX1A-204ENST00000563995 RTFDC1Q9BY42 306 aaPredicted RBP24.5■■□□□ 1.51
SLX1A-204ENST00000563995 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
SLX1A-204ENST00000563995 RTL9Q8NET4 1388 aa24.5■■□□□ 1.51
SLX1A-204ENST00000563995 CSF1RP07333 972 aa24.49■■□□□ 1.51
SLX1A-204ENST00000563995 RLBP1P12271 317 aa24.49■■□□□ 1.51
SLX1A-204ENST00000563995 GRM1Q13255 1194 aa24.49■■□□□ 1.51
SLX1A-204ENST00000563995 CST9Q5W186 159 aa24.49■■□□□ 1.51
SLX1A-204ENST00000563995 DUOX1Q9NRD9 1551 aa24.49■■□□□ 1.51
SLX1A-204ENST00000563995 TRAF5O00463 557 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 COL4A1P02462 1669 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 EPHA10Q5JZY3 1008 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 KAZALD1Q96I82 304 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 GREM2Q9H772 168 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 SEC31BQ9NQW1 1179 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 GPRC5DQ9NZD1 345 aa24.48■■□□□ 1.51
SLX1A-204ENST00000563995 PLIN1O60240 522 aa24.47■■□□□ 1.51
SLX1A-204ENST00000563995 BBOX1O75936 387 aa24.47■■□□□ 1.51
SLX1A-204ENST00000563995 MS4A1P11836 297 aa24.47■■□□□ 1.51
SLX1A-204ENST00000563995 CYP4F22Q6NT55 531 aa24.47■■□□□ 1.51
SLX1A-204ENST00000563995 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.47■■□□□ 1.51
SLX1A-204ENST00000563995 CELF1Q92879 486 aaKnown RBP24.47■■□□□ 1.51
SLX1A-204ENST00000563995 ADARB2Q9NS39 739 aaKnown RBP24.47■■□□□ 1.51
SLX1A-204ENST00000563995 TLL2Q9Y6L7 1015 aa24.47■■□□□ 1.51
SLX1A-204ENST00000563995 TNRC18O15417 2968 aaPredicted RBP24.46■■□□□ 1.51
SLX1A-204ENST00000563995 UBTFL1P0CB47 393 aaPredicted RBP24.46■■□□□ 1.51
SLX1A-204ENST00000563995 CXCL9Q07325 125 aa24.46■■□□□ 1.51
SLX1A-204ENST00000563995 MEIS3Q99687 375 aa24.46■■□□□ 1.51
SLX1A-204ENST00000563995 ZNRF3Q9ULT6 936 aa24.46■■□□□ 1.51
SLX1A-204ENST00000563995 DGKZQ13574 1117 aa24.45■■□□□ 1.5
SLX1A-204ENST00000563995 LMBR1LQ6UX01 489 aa24.45■■□□□ 1.5
SLX1A-204ENST00000563995 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
SLX1A-204ENST00000563995 SUPT20HQ8NEM7 779 aa24.45■■□□□ 1.5
SLX1A-204ENST00000563995 PANK1Q8TE04 598 aa24.45■■□□□ 1.5
SLX1A-204ENST00000563995 GNAI3P08754 354 aa24.44■■□□□ 1.5
SLX1A-204ENST00000563995 RPS8P62241 208 aaKnown RBP24.44■■□□□ 1.5
SLX1A-204ENST00000563995 ITPRIPQ8IWB1 547 aa24.44■■□□□ 1.5
SLX1A-204ENST00000563995 CDC5LQ99459 802 aaKnown RBP24.44■■□□□ 1.5
SLX1A-204ENST00000563995 TMX4Q9H1E5 349 aaPredicted RBP24.44■■□□□ 1.5
SLX1A-204ENST00000563995 BICC1Q9H694 974 aaKnown RBP24.44■■□□□ 1.5
SLX1A-204ENST00000563995 POLR2AP24928 1970 aaKnown RBP24.43■■□□□ 1.5
SLX1A-204ENST00000563995 ITGA6P23229 1130 aa24.43■■□□□ 1.5
SLX1A-204ENST00000563995 RABL6Q3YEC7 729 aaPredicted RBP24.43■■□□□ 1.5
SLX1A-204ENST00000563995 PRPF38BQ5VTL8 546 aaKnown RBP24.43■■□□□ 1.5
SLX1A-204ENST00000563995 SP8Q8IXZ3 490 aa24.43■■□□□ 1.5
SLX1A-204ENST00000563995 HDAC5Q9UQL6 1122 aa24.43■■□□□ 1.5
SLX1A-204ENST00000563995 CA12O43570 354 aa24.42■■□□□ 1.5
SLX1A-204ENST00000563995 GMPSP49915 693 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms