RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 RXRBP28702 533 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 FOXC1Q12948 553 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 SEPT12Q8IYM1 358 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 ZCRB1Q8TBF4 217 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 RUNDC1Q96C34 613 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 MRGPRX2Q96LB1 330 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 C1QTNF2Q9BXJ5 285 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 GZF1Q9H116 711 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 PKD1L3Q7Z443 1732 aa6.86□□□□□ -1.31
HERPUD1-207ENST00000563781 PARP4Q9UKK3 1724 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 MAGEB6P1A0A0J9YX57 407 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PHKG2P15735 406 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PRR20EP86478 221 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PRR20CP86479 221 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PRR20DP86480 221 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PRR20BP86481 221 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PRR20AP86496 221 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 NR1H3Q13133 447 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 DDB1Q16531 1140 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 AMOTQ4VCS5 1084 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 ZNF530Q6P9A1 599 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 MARCH10Q8NA82 808 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 EHBP1Q8NDI1 1231 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
HERPUD1-207ENST00000563781 SHANK3Q9BYB0 1731 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 PCDH11XQ9BZA7 1347 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 PCDH11YQ9BZA8 1340 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 MAPK8IP3Q9UPT6 1336 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 EXOC5O00471 708 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 APAF1O14727 1248 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 TMPOP42166 694 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 WASHC4Q2M389 1173 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 ERFEQ4G0M1 354 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 AKAP4Q5JQC9 854 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 ZBTB33Q86T24 672 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 FAM174AQ8TBP5 190 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 PNNQ9H307 717 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
HERPUD1-207ENST00000563781 KDM6AO15550 1401 aaPredicted RBP6.84□□□□□ -1.32
HERPUD1-207ENST00000563781 MAP3K5Q99683 1374 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 SENP3-EIF4A1A0A087X0R7 540 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 TNFRSF10AO00220 468 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 VAC14Q08AM6 782 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 TRMT44Q8IYL2 757 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 IFNL2Q8IZJ0 200 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 MPNDQ8N594 471 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 DDX54Q8TDD1 881 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 RRP7AQ9Y3A4 280 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 BCL9O00512 1426 aa6.83□□□□□ -1.32
HERPUD1-207ENST00000563781 CEMIPQ8WUJ3 1361 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 ADAMTS7Q9UKP4 1686 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 GNAT3A8MTJ3 354 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 IGSF3O75054 1194 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 RIPK4P57078 832 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 KCNA1Q09470 495 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 PDE3BQ13370 1112 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 KRT27Q7Z3Y8 459 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 WWC1Q8IX03 1113 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 IL17REQ8NFR9 667 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 SNIP1Q8TAD8 396 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 CDK15Q96Q40 435 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 TOR4AQ9NXH8 423 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 PDZRN3Q9UPQ7 1066 aa6.82□□□□□ -1.32
HERPUD1-207ENST00000563781 ZNF521Q96K83 1311 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 MRC1P22897 1456 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 HTATSF1O43719 755 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 NEFMP07197 916 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 DCTN1Q14203 1278 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 CCDC27Q2M243 656 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 C1orf141Q5JVX7 400 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 THUMPD2Q9BTF0 503 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 LGR6Q9HBX8 967 aa6.81□□□□□ -1.32
HERPUD1-207ENST00000563781 HSP90AB1P08238 724 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 MCCD1P59942 119 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 MCM10Q7L590 875 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 PTF1AQ7RTS3 328 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 DZIP3Q86Y13 1208 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 CYP4X1Q8N118 509 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 DCAF5Q96JK2 942 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 ZNF330Q9Y3S2 320 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 TOGARAM1Q9Y4F4 1720 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 MAP4K5Q9Y4K4 846 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 TLL2Q9Y6L7 1015 aa6.8□□□□□ -1.32
HERPUD1-207ENST00000563781 BRWD3Q6RI45 1802 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 TTC24A2A3L6 582 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 ERVV-2B6SEH9 535 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 E9PSI1 815 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 J3QL48 77 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 KCNQ2O43526 872 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 GFRA3O60609 400 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 GRM5P41594 1212 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 RBM25P49756 843 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 HNRNPUQ00839 825 aaKnown RBP eCLIP6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms