RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 CEP57L1Q8IYX8 460 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 IL17REQ8NFR9 667 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 MAP3K2Q9Y2U5 619 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 POLA2Q14181 598 aa14.84□□□□□ -0.03
CCDC187-201ENST00000563590 C11orf57Q6ZUT1 292 aaPredicted RBP14.84□□□□□ -0.03
CCDC187-201ENST00000563590 CADPS2Q86UW7 1296 aa14.84□□□□□ -0.03
CCDC187-201ENST00000563590 LEO1Q8WVC0 666 aaPredicted RBP14.84□□□□□ -0.03
CCDC187-201ENST00000563590 JAK2O60674 1132 aa14.84□□□□□ -0.03
CCDC187-201ENST00000563590 PIP4K2BP78356 416 aa14.84□□□□□ -0.03
CCDC187-201ENST00000563590 RAPGEF4Q8WZA2 1011 aa14.84□□□□□ -0.03
CCDC187-201ENST00000563590 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
CCDC187-201ENST00000563590 RBM6P78332 1123 aaKnown RBP14.84□□□□□ -0.03
CCDC187-201ENST00000563590 FTOQ9C0B1 505 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCDC187-201ENST00000563590 NPHP3Q7Z494 1330 aa14.83□□□□□ -0.03
CCDC187-201ENST00000563590 NRKQ7Z2Y5 1582 aa14.83□□□□□ -0.03
CCDC187-201ENST00000563590 SYCP1Q15431 976 aa14.83□□□□□ -0.03
CCDC187-201ENST00000563590 RBM8AQ9Y5S9 174 aaKnown RBP14.83□□□□□ -0.03
CCDC187-201ENST00000563590 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.04
CCDC187-201ENST00000563590 CLCN6P51797 869 aa14.83□□□□□ -0.04
CCDC187-201ENST00000563590 RAD51AP2Q09MP3 1159 aa14.83□□□□□ -0.04
CCDC187-201ENST00000563590 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.04
CCDC187-201ENST00000563590 BRF1Q92994 677 aa14.83□□□□□ -0.04
CCDC187-201ENST00000563590 ANKRD65E5RJM6 399 aa14.83□□□□□ -0.04
CCDC187-201ENST00000563590 KLHL34Q8N239 644 aa14.83□□□□□ -0.04
CCDC187-201ENST00000563590 CARD6Q9BX69 1037 aa14.83□□□□□ -0.04
CCDC187-201ENST00000563590 TMEM94Q12767 1356 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 HOXC9P31274 260 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 MCM6Q14566 821 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 NBPF6Q5VWK0 638 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 TTC5Q8N0Z6 440 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 KCNH5Q8NCM2 988 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 LRRN4CLQ8ND94 238 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 NBPF4Q96M43 638 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 CLSTN2Q9H4D0 955 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 PRDM11Q9NQV5 511 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 IFNKQ9P0W0 207 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 SERPINC1P01008 464 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 PSMA5P28066 241 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
CCDC187-201ENST00000563590 CCT2P78371 535 aaKnown RBP14.82□□□□□ -0.04
CCDC187-201ENST00000563590 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 CREBRFQ8IUR6 639 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 FSIP1Q8NA03 581 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
CCDC187-201ENST00000563590 RASSF4Q9H2L5 321 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 ELP1O95163 1332 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 TRIM66O15016 1216 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 PHACTR2O75167 634 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 STX1AQ16623 288 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 CREB3L3Q68CJ9 461 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 TM6SF1Q9BZW5 370 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 SNRKQ9NRH2 765 aa14.82□□□□□ -0.04
CCDC187-201ENST00000563590 CWC15Q9P013 229 aaKnown RBP14.82□□□□□ -0.04
CCDC187-201ENST00000563590 LEKR1Q6ZMV7 388 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 GOLGA6L1Q8N7Z2 621 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 USP6P35125 1406 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 CAPN2P17655 700 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 OAS2P29728 719 aaKnown RBP14.81□□□□□ -0.04
CCDC187-201ENST00000563590 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 PROSER3Q2NL68 480 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 HSP90AB3PQ58FF7 597 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 TAF7LQ5H9L4 462 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.81□□□□□ -0.04
CCDC187-201ENST00000563590 DNAAF4Q8WXU2 420 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 AK7Q96M32 723 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 MYD88Q99836 296 aa14.81□□□□□ -0.04
CCDC187-201ENST00000563590 ZNF335Q9H4Z2 1342 aaPredicted RBP14.81□□□□□ -0.04
CCDC187-201ENST00000563590 GOLGA8FQ08AF8 430 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 GOLGA8DPQ0D2H9 430 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 PGBD1Q96JS3 809 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 FER1L4A9Z1Z3 1794 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 GTF2A1P52655 376 aaPredicted RBP14.8□□□□□ -0.04
CCDC187-201ENST00000563590 NEXNQ0ZGT2 675 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 ANO10Q9NW15 660 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 TAF6LQ9Y6J9 622 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 C3P01024 1663 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 PNMA6AP0CW24 399 aaPredicted RBP14.8□□□□□ -0.04
CCDC187-201ENST00000563590 ST5P78524 1137 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 CFAP100Q494V2 611 aa14.8□□□□□ -0.04
CCDC187-201ENST00000563590 MON2Q7Z3U7 1717 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 ZSCAN26Q16670 478 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 OVOS2A0A0J9YW53 1432 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 OVOS2Q6IE36 1432 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 NEMFO60524 1076 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 CFAP45Q9UL16 551 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 PEAK1Q9H792 1746 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 XRN1Q8IZH2 1706 aaKnown RBP14.79□□□□□ -0.04
CCDC187-201ENST00000563590 EVCP57679 992 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 ECHDC1Q9NTX5 307 aa14.79□□□□□ -0.04
CCDC187-201ENST00000563590 NUTM2BA6NNL0 878 aaPredicted RBP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 NUTM2EB1AL46 878 aaPredicted RBP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 TOM1L2Q6ZVM7 507 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 TXLNBQ8N3L3 684 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 TSPYL1Q9H0U9 437 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms