RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 TNS3Q68CZ2 1445 aa11.31□□□□□ -0.6
NSMCE1-205ENST00000563512 KIF20BQ96Q89 1820 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 MYOM1P52179 1685 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 BACH1O14867 736 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 ITGA6P23229 1130 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 WDR44Q5JSH3 913 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 TIMMDC1Q9NPL8 285 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 RBM19Q9Y4C8 960 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 HRH3Q9Y5N1 445 aa11.3□□□□□ -0.6
NSMCE1-205ENST00000563512 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 LCE2AQ5TA79 106 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 MAFBQ9Y5Q3 323 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 PIK3C2AO00443 1686 aa11.29□□□□□ -0.6
NSMCE1-205ENST00000563512 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 DISP3Q9P2K9 1392 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 COL14A1Q05707 1796 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 EP400Q96L91 3159 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 CDC14CA4D256 554 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 HIRIP3Q9BW71 556 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 DNAAF2Q9NVR5 837 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 DYRK1BQ9Y463 629 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 NRAPQ86VF7 1730 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 LTN1O94822 1766 aa11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-205ENST00000563512 TMEM229AB2RXF0 380 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 PHKA2P46019 1235 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 SMTNP53814 917 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
NSMCE1-205ENST00000563512 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
NSMCE1-205ENST00000563512 FOXO3O43524 673 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 RASA1P20936 1047 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 GMPRP36959 345 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 VWA5B2Q8N398 1253 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 CDK19Q9BWU1 502 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 SPATA31A3Q5VYP0 1347 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 USP47Q96K76 1375 aa11.25□□□□□ -0.61
NSMCE1-205ENST00000563512 A6NJY4 79 aa11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 C4orf17Q53FE4 359 aa11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 LARGE2Q8N3Y3 721 aa11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 ZNF358Q9NW07 568 aa11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 NINLQ9Y2I6 1382 aa11.24□□□□□ -0.61
NSMCE1-205ENST00000563512 H7C1W4 665 aa11.23□□□□□ -0.61
NSMCE1-205ENST00000563512 CLDN10P78369 228 aa11.23□□□□□ -0.61
NSMCE1-205ENST00000563512 NANOS1Q8WY41 292 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-205ENST00000563512 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-205ENST00000563512 NIFKQ9BYG3 293 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-205ENST00000563512 A0A1B0GTH6 734 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 F11P03951 625 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 USP6P35125 1406 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 LCE2CQ5TA81 110 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 FOXR1Q6PIV2 292 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 BRWD3Q6RI45 1802 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 VRTNQ9H8Y1 702 aa11.22□□□□□ -0.61
NSMCE1-205ENST00000563512 FAM208AQ9UK61 1670 aaKnown RBP11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 CDK2AP1O14519 115 aa11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 WIPF1O43516 503 aa11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 GMCL1Q96IK5 515 aa11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 GPAMQ9HCL2 828 aa11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
NSMCE1-205ENST00000563512 LMO7Q8WWI1 1683 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 SLIT3O75094 1523 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 ABCC6O95255 1503 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 INSM1Q01101 510 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
NSMCE1-205ENST00000563512 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms