RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PDRG1Q9NUG6 133 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 CYP46A1Q9Y6A2 500 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 ANKRD18BA2A2Z9 1011 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 FAM177BA6PVY3 158 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 MCMDC2Q4G0Z9 681 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 LDHAL6AQ6ZMR3 332 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 CHAMP1Q96JM3 812 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
SMPD3-203ENST00000563226 VPS53Q5VIR6 699 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 AKAP2Q9Y2D5 859 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 SH3TC1Q8TE82 1336 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 METTL24Q5JXM2 366 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 USPL1Q5W0Q7 1092 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 MCTP1Q6DN14 999 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 PTF1AQ7RTS3 328 aa22.93■■□□□ 1.26
SMPD3-203ENST00000563226 DDX60Q8IY21 1712 aaKnown RBP22.92■■□□□ 1.26
SMPD3-203ENST00000563226 SCARF1Q14162 830 aa22.92■■□□□ 1.26
SMPD3-203ENST00000563226 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
SMPD3-203ENST00000563226 LRP5O75197 1615 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 HCLS1P14317 486 aaPredicted RBP22.91■■□□□ 1.26
SMPD3-203ENST00000563226 KCNQ4P56696 695 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 TTC39AQ5SRH9 613 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.91■■□□□ 1.26
SMPD3-203ENST00000563226 BCORQ6W2J9 1755 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 BRD1O95696 1058 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 GORABQ5T7V8 394 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 RNF20Q5VTR2 975 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 FNBP4Q8N3X1 1017 aaPredicted RBP22.91■■□□□ 1.26
SMPD3-203ENST00000563226 CNNM1Q9NRU3 951 aa22.91■■□□□ 1.26
SMPD3-203ENST00000563226 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
SMPD3-203ENST00000563226 CCDC158Q5M9N0 1113 aa22.9■■□□□ 1.26
SMPD3-203ENST00000563226 VGLL2Q8N8G2 317 aa22.9■■□□□ 1.26
SMPD3-203ENST00000563226 LINC00116Q8NCU8 138 aa22.9■■□□□ 1.26
SMPD3-203ENST00000563226 ZNF831Q5JPB2 1677 aa22.9■■□□□ 1.26
SMPD3-203ENST00000563226 GOLGA6L22H0YM25 854 aa22.89■■□□□ 1.26
SMPD3-203ENST00000563226 FKBP4Q02790 459 aaKnown RBP eCLIP22.89■■□□□ 1.26
SMPD3-203ENST00000563226 TCEANC2Q96MN5 208 aa22.89■■□□□ 1.26
SMPD3-203ENST00000563226 ZMYM1Q5SVZ6 1142 aa22.89■■□□□ 1.25
SMPD3-203ENST00000563226 AKAP11Q9UKA4 1901 aa22.89■■□□□ 1.25
SMPD3-203ENST00000563226 PTMSP20962 102 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 PI16Q6UXB8 463 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 UTP14AQ9BVJ6 771 aaKnown RBP22.88■■□□□ 1.25
SMPD3-203ENST00000563226 HMG20BQ9P0W2 317 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 DTNBO60941 627 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 PSMA5P28066 241 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 ST3GAL1Q11201 340 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 TSGA10IPQ3SY00 556 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 HELLSQ9NRZ9 838 aa22.88■■□□□ 1.25
SMPD3-203ENST00000563226 LAMB2P55268 1798 aa22.87■■□□□ 1.25
SMPD3-203ENST00000563226 MAST3O60307 1309 aa22.87■■□□□ 1.25
SMPD3-203ENST00000563226 BLOC1S2Q6QNY1 142 aa22.87■■□□□ 1.25
SMPD3-203ENST00000563226 USP21Q9UK80 565 aa22.87■■□□□ 1.25
SMPD3-203ENST00000563226 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMPD3-203ENST00000563226 THSD7AQ9UPZ6 1657 aa22.87■■□□□ 1.25
SMPD3-203ENST00000563226 RNF113AO15541 343 aaKnown RBP22.86■■□□□ 1.25
SMPD3-203ENST00000563226 RPS6KB1P23443 525 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 ZAP70P43403 619 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 CCDC83Q8IWF9 413 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 LMBRD1Q9NUN5 540 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 U3KPZ7 1027 aaPredicted RBP22.86■■□□□ 1.25
SMPD3-203ENST00000563226 BTAF1O14981 1849 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 MYH7P12883 1935 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 NTSR2O95665 410 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 CYP21A2P08686 494 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 ME3Q16798 604 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 SKOR2Q2VWA4 1001 aaPredicted RBP22.86■■□□□ 1.25
SMPD3-203ENST00000563226 TPCN1Q9ULQ1 816 aa22.86■■□□□ 1.25
SMPD3-203ENST00000563226 LAMA4Q16363 1823 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 M0R2C6 588 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 PARP10Q53GL7 1025 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 FAM182BQ5T319 152 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 SMIM5Q71RC9 77 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 PDE8BO95263 885 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 AK7Q96M32 723 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 SEC31BQ9NQW1 1179 aa22.85■■□□□ 1.25
SMPD3-203ENST00000563226 MCAMP43121 646 aa22.84■■□□□ 1.25
SMPD3-203ENST00000563226 NECAB1Q8N987 351 aa22.84■■□□□ 1.25
SMPD3-203ENST00000563226 HELBQ8NG08 1087 aaPredicted RBP22.84■■□□□ 1.25
SMPD3-203ENST00000563226 MYO5AQ9Y4I1 1855 aaKnown RBP22.84■■□□□ 1.25
SMPD3-203ENST00000563226 ARAP2Q8WZ64 1704 aa22.84■■□□□ 1.25
SMPD3-203ENST00000563226 TOB2Q14106 344 aaPredicted RBP22.83■■□□□ 1.25
SMPD3-203ENST00000563226 TICAM2Q86XR7 235 aa22.83■■□□□ 1.25
SMPD3-203ENST00000563226 OSBP2Q969R2 916 aa22.83■■□□□ 1.25
SMPD3-203ENST00000563226 ZSCAN31Q96LW9 406 aaPredicted RBP22.83■■□□□ 1.25
SMPD3-203ENST00000563226 ABCC12Q96J65 1359 aa22.83■■□□□ 1.25
SMPD3-203ENST00000563226 COL4A1P02462 1669 aa22.83■■□□□ 1.25
SMPD3-203ENST00000563226 SPATA31A6Q5VVP1 1343 aa22.83■■□□□ 1.25
SMPD3-203ENST00000563226 A0A0G2JLW4 131 aa22.83■■□□□ 1.24
SMPD3-203ENST00000563226 FSD2A1L4K1 749 aa22.83■■□□□ 1.24
SMPD3-203ENST00000563226 SH2B1Q9NRF2 756 aaPredicted RBP22.83■■□□□ 1.24
SMPD3-203ENST00000563226 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.83■■□□□ 1.24
SMPD3-203ENST00000563226 STOX1Q6ZVD7 989 aa22.82■■□□□ 1.24
SMPD3-203ENST00000563226 DDX49Q9Y6V7 483 aaKnown RBP22.82■■□□□ 1.24
SMPD3-203ENST00000563226 NHSQ6T4R5 1651 aa22.82■■□□□ 1.24
SMPD3-203ENST00000563226 PRPF40AO75400 957 aaKnown RBP22.81■■□□□ 1.24
SMPD3-203ENST00000563226 HSPD1P10809 573 aaKnown RBP22.81■■□□□ 1.24
SMPD3-203ENST00000563226 DSCC1Q9BVC3 393 aa22.81■■□□□ 1.24
SMPD3-203ENST00000563226 SMC3Q9UQE7 1217 aa22.81■■□□□ 1.24
SMPD3-203ENST00000563226 CASZ1Q86V15 1759 aa22.81■■□□□ 1.24
SMPD3-203ENST00000563226 KRT32Q14532 448 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms