RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 TMC1Q8TDI8 760 aa5.37□□□□□ -1.55
CHD9-207ENST00000562806 CCDC87Q9NVE4 849 aa5.37□□□□□ -1.55
CHD9-207ENST00000562806 FAM177BA6PVY3 158 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 M0R082 166 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 PHACTR2O75167 634 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 TNFRSF21O75509 655 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 KIF4AO95239 1232 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 EDN3P14138 238 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 EIF2AK2P19525 551 aaKnown RBP5.36□□□□□ -1.55
CHD9-207ENST00000562806 KCNMA1Q12791 1236 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 PSAPL1Q6NUJ1 521 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 C20orf204Q6ZNR8 217 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 NCAPG2Q86XI2 1143 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 ZNF417Q8TAU3 575 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 ZNF587Q96SQ5 575 aaPredicted RBP5.36□□□□□ -1.55
CHD9-207ENST00000562806 FAM129BQ96TA1 746 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 MUC3BQ9H195 1237 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 DNAJC25Q9H1X3 360 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 GGNBP2Q9H3C7 697 aa5.36□□□□□ -1.55
CHD9-207ENST00000562806 ZBTB7CA1YPR0 619 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 ZBTB42B2RXF5 422 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 SMNDC1O75940 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
CHD9-207ENST00000562806 CPB1P15086 417 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 LINC00114Q6XXX2 140 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 ALKBH8Q96BT7 664 aaKnown RBP5.35□□□□□ -1.55
CHD9-207ENST00000562806 JPH1Q9HDC5 661 aaPredicted RBP5.35□□□□□ -1.55
CHD9-207ENST00000562806 TMEM63CQ9P1W3 806 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 AMOTL2Q9Y2J4 779 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 STARD13Q9Y3M8 1113 aa5.35□□□□□ -1.55
CHD9-207ENST00000562806 EIF4EBP3O60516 100 aaPredicted RBP5.34□□□□□ -1.55
CHD9-207ENST00000562806 ALBP02768 609 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 MAPK1P28482 360 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 FGD1P98174 961 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 PRRT3Q5FWE3 981 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 PERM1Q5SV97 790 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 SND1Q7KZF4 910 aaKnown RBP eCLIP5.34□□□□□ -1.55
CHD9-207ENST00000562806 DTWD1Q8N5C7 304 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 PLD4Q96BZ4 506 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 LPIN3Q9BQK8 851 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 SRA1Q9HD15 236 aaKnown RBP5.34□□□□□ -1.55
CHD9-207ENST00000562806 SALL4Q9UJQ4 1053 aa5.34□□□□□ -1.55
CHD9-207ENST00000562806 CNTNAP5Q8WYK1 1306 aa5.33□□□□□ -1.56
CHD9-207ENST00000562806 CPNE3O75131 537 aaKnown RBP5.33□□□□□ -1.56
CHD9-207ENST00000562806 ERCC3P19447 782 aa5.33□□□□□ -1.56
CHD9-207ENST00000562806 RAC1P63000 192 aa5.33□□□□□ -1.56
CHD9-207ENST00000562806 SNRPNP63162 240 aaKnown RBP5.33□□□□□ -1.56
CHD9-207ENST00000562806 MAP4K3Q8IVH8 894 aa5.33□□□□□ -1.56
CHD9-207ENST00000562806 C1orf127Q8N9H9 656 aa5.33□□□□□ -1.56
CHD9-207ENST00000562806 NSUN5Q96P11 429 aaKnown RBP5.33□□□□□ -1.56
CHD9-207ENST00000562806 SMG9Q9H0W8 520 aaKnown RBP5.33□□□□□ -1.56
CHD9-207ENST00000562806 ZFYVE28Q9HCC9 887 aa5.33□□□□□ -1.56
CHD9-207ENST00000562806 HOXB4P17483 251 aaPredicted RBP5.32□□□□□ -1.56
CHD9-207ENST00000562806 AFF1P51825 1210 aaKnown RBP5.32□□□□□ -1.56
CHD9-207ENST00000562806 PLCB3Q01970 1234 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 MLLT1Q03111 559 aaPredicted RBP5.32□□□□□ -1.56
CHD9-207ENST00000562806 TRIM28Q13263 835 aaKnown RBP5.32□□□□□ -1.56
CHD9-207ENST00000562806 MSL1Q68DK7 614 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 WFDC8Q8IUA0 241 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 CEP120Q8N960 986 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 NUDT8Q8WV74 236 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 ASB16Q96NS5 453 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 NACC1Q96RE7 527 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 PLVAPQ9BX97 442 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 PBX4Q9BYU1 374 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 CNTN3Q9P232 1028 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 NAGPAQ9UK23 515 aa5.32□□□□□ -1.56
CHD9-207ENST00000562806 A6NHS1 94 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 J3QW42 95 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 SPATA31C1P0DKV0 1188 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 NID1P14543 1247 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 PTPRAP18433 802 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 IRS1P35568 1242 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 COL19A1Q14993 1142 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 TRAPPC3LQ5T215 181 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 HFE2Q6ZVN8 426 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 TMC7Q7Z402 723 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 GALNT12Q8IXK2 581 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 CHRDQ9H2X0 955 aa5.31□□□□□ -1.56
CHD9-207ENST00000562806 CABP4P57796 275 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 RASSF7Q02833 373 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 CEP135Q66GS9 1140 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 FAM117BQ6P1L5 589 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 TMEM151AQ8N4L1 468 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 TMEM102Q8N9M5 508 aaPredicted RBP5.3□□□□□ -1.56
CHD9-207ENST00000562806 WNT8BQ93098 351 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 ZFYVE1Q9HBF4 777 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 PPP4R2Q9NY27 417 aa5.3□□□□□ -1.56
CHD9-207ENST00000562806 EREGO14944 169 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 TREHO43280 583 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 APBA3O96018 575 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 CYP2E1P05181 493 aaPredicted RBP5.29□□□□□ -1.56
CHD9-207ENST00000562806 CDC27P30260 824 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 ATP2B2Q01814 1243 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 COL9A3Q14050 684 aaPredicted RBP5.29□□□□□ -1.56
CHD9-207ENST00000562806 FBF1Q8TES7 1133 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 TRIM11Q96F44 468 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 CSRNP1Q96S65 589 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 OSMRQ99650 979 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 ADAM19Q9H013 955 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 283.7 ms