RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 LMBR1LQ6UX01 489 aa20.92■□□□□ 0.94
LINC01225-201ENST00000562271 ANP32BQ92688 251 aaKnown RBP20.92■□□□□ 0.94
LINC01225-201ENST00000562271 TMX3Q96JJ7 454 aa20.92■□□□□ 0.94
LINC01225-201ENST00000562271 ANO2Q9NQ90 1003 aa20.92■□□□□ 0.94
LINC01225-201ENST00000562271 PODXL2Q9NZ53 605 aa20.92■□□□□ 0.94
LINC01225-201ENST00000562271 UTYO14607 1347 aa20.91■□□□□ 0.94
LINC01225-201ENST00000562271 AOX1Q06278 1338 aa20.91■□□□□ 0.94
LINC01225-201ENST00000562271 CARMIL3Q8ND23 1372 aa20.91■□□□□ 0.94
LINC01225-201ENST00000562271 DDX60Q8IY21 1712 aaKnown RBP20.91■□□□□ 0.94
LINC01225-201ENST00000562271 IRS4O14654 1257 aaPredicted RBP20.9■□□□□ 0.94
LINC01225-201ENST00000562271 PRPF40AO75400 957 aaKnown RBP20.9■□□□□ 0.94
LINC01225-201ENST00000562271 ZSCAN23Q3MJ62 389 aa20.9■□□□□ 0.94
LINC01225-201ENST00000562271 ZBTB38Q8NAP3 1195 aaPredicted RBP20.9■□□□□ 0.94
LINC01225-201ENST00000562271 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
LINC01225-201ENST00000562271 PPP1R9BQ96SB3 815 aa20.89■□□□□ 0.94
LINC01225-201ENST00000562271 R3HDM1Q15032 1099 aaKnown RBP20.89■□□□□ 0.93
LINC01225-201ENST00000562271 SETDB2Q96T68 719 aa20.89■□□□□ 0.93
LINC01225-201ENST00000562271 PALD1Q9ULE6 856 aa20.89■□□□□ 0.93
LINC01225-201ENST00000562271 STK32BQ9NY57 414 aa20.88■□□□□ 0.93
LINC01225-201ENST00000562271 RAB11FIP3O75154 756 aa20.88■□□□□ 0.93
LINC01225-201ENST00000562271 PCCAP05165 728 aaPredicted RBP20.88■□□□□ 0.93
LINC01225-201ENST00000562271 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
LINC01225-201ENST00000562271 CUL4AQ13619 759 aa20.88■□□□□ 0.93
LINC01225-201ENST00000562271 UTP14AQ9BVJ6 771 aaKnown RBP20.88■□□□□ 0.93
LINC01225-201ENST00000562271 GREM2Q9H772 168 aa20.88■□□□□ 0.93
LINC01225-201ENST00000562271 SEC31BQ9NQW1 1179 aa20.88■□□□□ 0.93
LINC01225-201ENST00000562271 TNRC6CQ9HCJ0 1690 aaKnown RBP20.87■□□□□ 0.93
LINC01225-201ENST00000562271 MYH3P11055 1940 aa20.87■□□□□ 0.93
LINC01225-201ENST00000562271 NBPF5PQ86XG9 351 aaPredicted RBP20.87■□□□□ 0.93
LINC01225-201ENST00000562271 IL17RAQ96F46 866 aa20.87■□□□□ 0.93
LINC01225-201ENST00000562271 IL1RAPL2Q9NP60 686 aa20.87■□□□□ 0.93
LINC01225-201ENST00000562271 ZNF652Q9Y2D9 606 aa20.87■□□□□ 0.93
LINC01225-201ENST00000562271 EPB41L2O43491 1005 aaKnown RBP20.87■□□□□ 0.93
LINC01225-201ENST00000562271 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
LINC01225-201ENST00000562271 INTS4Q96HW7 963 aaKnown RBP20.87■□□□□ 0.93
LINC01225-201ENST00000562271 SPEF2Q9C093 1822 aa20.86■□□□□ 0.93
LINC01225-201ENST00000562271 ZBTB7AO95365 584 aa20.86■□□□□ 0.93
LINC01225-201ENST00000562271 TPM2P07951 284 aa20.86■□□□□ 0.93
LINC01225-201ENST00000562271 CLEC4GQ6UXB4 293 aa20.86■□□□□ 0.93
LINC01225-201ENST00000562271 GPT2Q8TD30 523 aa20.86■□□□□ 0.93
LINC01225-201ENST00000562271 PUS3Q9BZE2 481 aaKnown RBP20.86■□□□□ 0.93
LINC01225-201ENST00000562271 PDCL3Q9H2J4 239 aa20.85■□□□□ 0.93
LINC01225-201ENST00000562271 LAMB2P55268 1798 aa20.85■□□□□ 0.93
LINC01225-201ENST00000562271 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
LINC01225-201ENST00000562271 COL24A1Q17RW2 1714 aa20.85■□□□□ 0.93
LINC01225-201ENST00000562271 SURF6O75683 361 aaKnown RBP20.85■□□□□ 0.93
LINC01225-201ENST00000562271 POLA2Q14181 598 aa20.85■□□□□ 0.93
LINC01225-201ENST00000562271 MMP10P09238 476 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 ADRA2BP18089 450 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
LINC01225-201ENST00000562271 WWC3Q9ULE0 1092 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 NPHP1O15259 732 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 BRD1O95696 1058 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 TM4SF1P30408 202 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 TTLL11Q8NHH1 800 aa20.84■□□□□ 0.93
LINC01225-201ENST00000562271 POLRMTO00411 1230 aaKnown RBP20.83■□□□□ 0.93
LINC01225-201ENST00000562271 RFX5P48382 616 aaPredicted RBP20.83■□□□□ 0.93
LINC01225-201ENST00000562271 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
LINC01225-201ENST00000562271 WTIPA6NIX2 430 aaPredicted RBP20.83■□□□□ 0.92
LINC01225-201ENST00000562271 SERPINB2P05120 415 aa20.83■□□□□ 0.92
LINC01225-201ENST00000562271 LRRC24Q50LG9 513 aa20.83■□□□□ 0.92
LINC01225-201ENST00000562271 PRR5LQ6MZQ0 368 aa20.83■□□□□ 0.92
LINC01225-201ENST00000562271 ATF5Q9Y2D1 282 aaPredicted RBP20.83■□□□□ 0.92
LINC01225-201ENST00000562271 FOXD4L5Q5VV16 416 aaPredicted RBP20.82■□□□□ 0.92
LINC01225-201ENST00000562271 FOXD4L4Q8WXT5 416 aaPredicted RBP20.82■□□□□ 0.92
LINC01225-201ENST00000562271 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
LINC01225-201ENST00000562271 SNAP23O00161 211 aa20.81■□□□□ 0.92
LINC01225-201ENST00000562271 PTPN12Q05209 780 aaKnown RBP20.81■□□□□ 0.92
LINC01225-201ENST00000562271 RABL6Q3YEC7 729 aaPredicted RBP20.81■□□□□ 0.92
LINC01225-201ENST00000562271 UPF3BQ9BZI7 483 aaKnown RBP20.81■□□□□ 0.92
LINC01225-201ENST00000562271 MBD3O95983 291 aa20.81■□□□□ 0.92
LINC01225-201ENST00000562271 HSPA4P34932 840 aa20.81■□□□□ 0.92
LINC01225-201ENST00000562271 CTSWP56202 376 aa20.81■□□□□ 0.92
LINC01225-201ENST00000562271 NOL8Q76FK4 1167 aaKnown RBP20.81■□□□□ 0.92
LINC01225-201ENST00000562271 CHAMP1Q96JM3 812 aa20.81■□□□□ 0.92
LINC01225-201ENST00000562271 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
LINC01225-201ENST00000562271 PI4K2BQ8TCG2 481 aa20.8■□□□□ 0.92
LINC01225-201ENST00000562271 IL25Q9H293 177 aa20.8■□□□□ 0.92
LINC01225-201ENST00000562271 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
LINC01225-201ENST00000562271 RBSNQ9H1K0 784 aa20.8■□□□□ 0.92
LINC01225-201ENST00000562271 ITGA6P23229 1130 aa20.79■□□□□ 0.92
LINC01225-201ENST00000562271 TMEM63CQ9P1W3 806 aa20.79■□□□□ 0.92
LINC01225-201ENST00000562271 ANKRD31Q8N7Z5 1873 aa20.79■□□□□ 0.92
LINC01225-201ENST00000562271 CNBD1Q8NA66 436 aa20.79■□□□□ 0.92
LINC01225-201ENST00000562271 MTX1Q13505 466 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 ZSCAN30Q86W11 494 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 CCDC125Q86Z20 511 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 PDE8AO60658 829 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 SASH1O94885 1247 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 LRSAM1Q6UWE0 723 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 CNTROBQ8N137 903 aa20.78■□□□□ 0.92
LINC01225-201ENST00000562271 HELBQ8NG08 1087 aaPredicted RBP20.78■□□□□ 0.92
LINC01225-201ENST00000562271 RAD50Q92878 1312 aa20.77■□□□□ 0.92
LINC01225-201ENST00000562271 CDHR2Q9BYE9 1310 aa20.77■□□□□ 0.92
LINC01225-201ENST00000562271 SGSM2O43147 1006 aa20.77■□□□□ 0.92
LINC01225-201ENST00000562271 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.92
LINC01225-201ENST00000562271 CSF1RP07333 972 aa20.76■□□□□ 0.91
LINC01225-201ENST00000562271 TPTE2Q6XPS3 522 aa20.76■□□□□ 0.91
LINC01225-201ENST00000562271 NSFL1CQ9UNZ2 370 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms