RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 HIP1O00291 1037 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 MCCP23508 829 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 NEK4P51957 841 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 RAB3GAP1Q15042 981 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 SMIM5Q71RC9 77 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 AK7Q96M32 723 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 FSD1Q9BTV5 496 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 LAMB2P55268 1798 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 SCN7AQ01118 1682 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 LY75O60449 1722 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 ST18O60284 1047 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 CUL4AQ13619 759 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 SMAP1Q8IYB5 467 aaPredicted RBP12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 MAP7D2Q96T17 732 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
TUBGCP4-202ENST00000561691 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 TAF5LO75529 589 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 CYP2E1P05181 493 aaPredicted RBP12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 TERF1P54274 439 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 KBTBD3Q8NAB2 608 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 NEUROD6Q96NK8 337 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 TAF6LQ9Y6J9 622 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
TUBGCP4-202ENST00000561691 SPEF2Q9C093 1822 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 RGL2O15211 777 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 MCM4P33991 863 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 SCARF1Q14162 830 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 SLFNL1Q499Z3 407 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 DDX46Q7L014 1031 aaKnown RBP12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 ZGPATQ8N5A5 531 aaKnown RBP12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 UTP14AQ9BVJ6 771 aaKnown RBP12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 RBM8AQ9Y5S9 174 aaKnown RBP12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 FGFR2P21802 821 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 ADCK5Q3MIX3 580 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
TUBGCP4-202ENST00000561691 RPAP1Q9BWH6 1393 aaPredicted RBP12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 TNPO1Q92973 898 aaKnown RBP12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 PAG1Q9NWQ8 432 aa12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 ABCC12Q96J65 1359 aa12.28□□□□□ -0.44
TUBGCP4-202ENST00000561691 GOLIM4O00461 696 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 SLC27A2O14975 620 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 RPS6KA4O75676 772 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 CREB3L3Q68CJ9 461 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 CLEC17AQ6ZS10 378 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 SEPT12Q8IYM1 358 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 TM6SF1Q9BZW5 370 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 SEC31BQ9NQW1 1179 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 AKAP2Q9Y2D5 859 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 ZDHHC9Q9Y397 364 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.44
TUBGCP4-202ENST00000561691 ARAP2Q8WZ64 1704 aa12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 CPA1P15085 419 aa12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 MCM2P49736 904 aa12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 ZMYM1Q5SVZ6 1142 aa12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 CCDC129Q6ZRS4 1044 aa12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 ZNF512BQ96KM6 892 aaPredicted RBP12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
TUBGCP4-202ENST00000561691 PDE8BO95263 885 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 SSFA2P28290 1259 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 PKP1Q13835 747 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 ATP2B3Q16720 1220 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
TUBGCP4-202ENST00000561691 FAM177BA6PVY3 158 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 TAF7LQ5H9L4 462 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 MEX3CQ5U5Q3 659 aaKnown RBP12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 FOXP2O15409 715 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 OFD1O75665 1012 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 MCAMP43121 646 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms