RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RASGRF1Q13972 1273 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 DDR2Q16832 855 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 MAP9Q49MG5 647 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 C2orf27AQ580R0 203 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 NBPF10Q6P3W6 841 aaKnown RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 DTHD1Q6ZMT9 781 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 KIAA0907Q7Z7F0 614 aaPredicted RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 CHPFQ8IZ52 775 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 FAM9BQ8IZU0 186 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 MYO1HQ8N1T3 1032 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 PGBD3Q8N328 593 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 SAMD3Q8N6K7 520 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 ZSWIM2Q8NEG5 633 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 OR6P1Q8NGX9 317 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 STAG1Q8WVM7 1258 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 FOXJ1Q92949 421 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 PMEPA1Q969W9 287 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 NLRP3Q96P20 1036 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 NT5C1AQ9BXI3 368 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 CFHR5Q9BXR6 569 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 SLC4A5Q9BY07 1137 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 OSBPL7Q9BZF2 842 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 EHD4Q9H223 541 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 ZHX3Q9H4I2 956 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 CAAP1Q9H8G2 361 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 QTRT2Q9H974 415 aaKnown RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 ATG3Q9NT62 314 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 GNL3LQ9NVN8 582 aaKnown RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 TMEM260Q9NX78 707 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 KLK14Q9P0G3 267 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 SCHIP1Q9P0W5 487 aaPredicted RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 PFDN2Q9UHV9 154 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 ANAPC4Q9UJX5 808 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 HPS5Q9UPZ3 1129 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 MAPK8IP1Q9UQF2 711 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 A6NHS1 94 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 UBAP1LF5GYI3 381 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 CDK2AP1O14519 115 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 TCERG1O14776 1098 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 ANP32CO43423 234 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 TSPAN6O43657 245 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 KIF4AO95239 1232 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 BPNT1O95861 308 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 IGHA2P01877 340 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 EPB42P16452 691 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 LIG1P18858 919 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 IRS1P35568 1242 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 GNALP38405 381 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SCTRP47872 440 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SOX9P48436 509 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ZNF165P49910 485 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SCNN1DP51172 638 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 MMP16P51512 607 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 GUCY2FP51841 1108 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 COPS2P61201 443 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ERVK-9P63128 1117 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 FAM160A1Q05DH4 1040 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 POU5F1BQ06416 359 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 RAPGEF1Q13905 1077 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 DHX8Q14562 1220 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 TTF1Q15361 905 aaPredicted RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 VPS72Q15906 364 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 C21orf62-AS1Q17RA5 79 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 CWF19L2Q2TBE0 894 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 SEZ6Q53EL9 994 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 BRDTQ58F21 947 aaPredicted RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 SYCP2LQ5T4T6 812 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 TTC39BQ5VTQ0 682 aaPredicted RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 PCNX4Q63HM2 1172 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 TMEM214Q6NUQ4 689 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 PI16Q6UXB8 463 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 CCDC81Q6ZN84 652 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 KRBA2Q6ZNG9 492 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SH3RF1Q7Z6J0 888 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 C11orf96Q7Z7L8 435 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ETFBKMTQ8IXQ9 262 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 NIM1KQ8IY84 436 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 CMTR1Q8N1G2 835 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 LILRB2Q8N423 598 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 PDILTQ8N807 584 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 GOLM1Q8NBJ4 401 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 RHPN1Q8TCX5 695 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 TSR2Q969E8 191 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 TRIM63Q969Q1 353 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 MFSD3Q96ES6 412 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SLC4A9Q96Q91 983 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SMAD5Q99717 465 aaKnown RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 APBA2Q99767 749 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 PHACTR1Q9C0D0 580 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 CEP44Q9C0F1 390 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ZFYVE1Q9HBF4 777 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ETNK1Q9HBU6 452 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ZFYVE28Q9HCC9 887 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 NPHS2Q9NP85 383 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 AASDHPPTQ9NRN7 309 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 SWAP70Q9UH65 585 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 ADAMTS1Q9UHI8 967 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 FBXO9Q9UK97 447 aaPredicted RBP2.59□□□□□ -1.99
RTF1-207ENST00000561076 LRFN2Q9ULH4 789 aa2.59□□□□□ -1.99
RTF1-207ENST00000561076 LEMD3Q9Y2U8 911 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms