RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PHF14O94880 888 aa20.75■□□□□ 0.91
HDDC3-206ENST00000561036 PDE8BO95263 885 aa20.75■□□□□ 0.91
HDDC3-206ENST00000561036 IGHMBP2P38935 993 aaKnown RBP20.75■□□□□ 0.91
HDDC3-206ENST00000561036 MPHOSPH8Q99549 860 aa20.75■□□□□ 0.91
HDDC3-206ENST00000561036 RAD50Q92878 1312 aa20.75■□□□□ 0.91
HDDC3-206ENST00000561036 SPEF2Q9C093 1822 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 APBA3O96018 575 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 RABEP1Q15276 862 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 GORABQ5T7V8 394 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 XAGE2Q96GT9 111 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 ZNF512BQ96KM6 892 aaPredicted RBP20.74■□□□□ 0.91
HDDC3-206ENST00000561036 FSD1Q9BTV5 496 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 SNRKQ9NRH2 765 aa20.74■□□□□ 0.91
HDDC3-206ENST00000561036 RGPD3A6NKT7 1758 aaPredicted RBP20.73■□□□□ 0.91
HDDC3-206ENST00000561036 RGPD4Q7Z3J3 1758 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 ANAPC15P60006 121 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 PUM3Q15397 648 aaKnown RBP20.73■□□□□ 0.91
HDDC3-206ENST00000561036 KIAA1211Q6ZU35 1233 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 IL17RAQ96F46 866 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 NLRP3Q96P20 1036 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 ANO2Q9NQ90 1003 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
HDDC3-206ENST00000561036 NFIXQ14938 502 aa20.72■□□□□ 0.91
HDDC3-206ENST00000561036 POTEAQ6S8J7 498 aa20.72■□□□□ 0.91
HDDC3-206ENST00000561036 LPIN2Q92539 896 aa20.72■□□□□ 0.91
HDDC3-206ENST00000561036 IFIT1P09914 478 aaKnown RBP20.71■□□□□ 0.91
HDDC3-206ENST00000561036 FGFR2P21802 821 aa20.71■□□□□ 0.91
HDDC3-206ENST00000561036 TTC39AQ5SRH9 613 aa20.71■□□□□ 0.91
HDDC3-206ENST00000561036 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
HDDC3-206ENST00000561036 KBTBD3Q8NAB2 608 aa20.71■□□□□ 0.91
HDDC3-206ENST00000561036 TBC1D2Q9BYX2 928 aa20.71■□□□□ 0.91
HDDC3-206ENST00000561036 GYS1P13807 737 aa20.7■□□□□ 0.9
HDDC3-206ENST00000561036 ADORA1P30542 326 aa20.7■□□□□ 0.9
HDDC3-206ENST00000561036 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
HDDC3-206ENST00000561036 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
HDDC3-206ENST00000561036 DNAJC2Q99543 621 aaKnown RBP20.7■□□□□ 0.9
HDDC3-206ENST00000561036 PAG1Q9NWQ8 432 aa20.7■□□□□ 0.9
HDDC3-206ENST00000561036 SLC5A1P13866 664 aa20.69■□□□□ 0.9
HDDC3-206ENST00000561036 NMIQ13287 307 aaPredicted RBP20.69■□□□□ 0.9
HDDC3-206ENST00000561036 LRRFIP1Q32MZ4 808 aaKnown RBP20.69■□□□□ 0.9
HDDC3-206ENST00000561036 HSCBQ8IWL3 235 aa20.69■□□□□ 0.9
HDDC3-206ENST00000561036 AKT1S1Q96B36 256 aa20.69■□□□□ 0.9
HDDC3-206ENST00000561036 LSG1Q9H089 658 aaKnown RBP20.69■□□□□ 0.9
HDDC3-206ENST00000561036 BSDC1Q9NW68 430 aaPredicted RBP20.69■□□□□ 0.9
HDDC3-206ENST00000561036 ARAP2Q8WZ64 1704 aa20.69■□□□□ 0.9
HDDC3-206ENST00000561036 TNS1Q9HBL0 1735 aaKnown RBP20.69■□□□□ 0.9
HDDC3-206ENST00000561036 UQCRFS1P1P0C7P4 283 aa20.68■□□□□ 0.9
HDDC3-206ENST00000561036 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
HDDC3-206ENST00000561036 TM4SF1P30408 202 aa20.67■□□□□ 0.9
HDDC3-206ENST00000561036 HSPA4P34932 840 aa20.67■□□□□ 0.9
HDDC3-206ENST00000561036 CNBD1Q8NA66 436 aa20.67■□□□□ 0.9
HDDC3-206ENST00000561036 IL25Q9H293 177 aa20.67■□□□□ 0.9
HDDC3-206ENST00000561036 GOLIM4O00461 696 aa20.66■□□□□ 0.9
HDDC3-206ENST00000561036 SLC4A3P48751 1232 aa20.66■□□□□ 0.9
HDDC3-206ENST00000561036 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
HDDC3-206ENST00000561036 TFCP2L1Q9NZI6 479 aa20.66■□□□□ 0.9
HDDC3-206ENST00000561036 CASZ1Q86V15 1759 aa20.66■□□□□ 0.9
HDDC3-206ENST00000561036 MED23Q9ULK4 1368 aa20.65■□□□□ 0.9
HDDC3-206ENST00000561036 NPHP1O15259 732 aa20.65■□□□□ 0.9
HDDC3-206ENST00000561036 ARID4AP29374 1257 aaPredicted RBP20.65■□□□□ 0.9
HDDC3-206ENST00000561036 CHRNDQ07001 517 aa20.65■□□□□ 0.9
HDDC3-206ENST00000561036 FAM227BQ96M60 508 aa20.65■□□□□ 0.9
HDDC3-206ENST00000561036 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
HDDC3-206ENST00000561036 A0A0D9SFI3 127 aa20.64■□□□□ 0.89
HDDC3-206ENST00000561036 RPS8P62241 208 aaKnown RBP20.64■□□□□ 0.89
HDDC3-206ENST00000561036 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
HDDC3-206ENST00000561036 HELLSQ9NRZ9 838 aa20.64■□□□□ 0.89
HDDC3-206ENST00000561036 ZFYP08048 801 aaPredicted RBP20.63■□□□□ 0.89
HDDC3-206ENST00000561036 ST5P78524 1137 aa20.63■□□□□ 0.89
HDDC3-206ENST00000561036 UBE4AQ14139 1066 aa20.63■□□□□ 0.89
HDDC3-206ENST00000561036 ZNF827Q17R98 1081 aa20.63■□□□□ 0.89
HDDC3-206ENST00000561036 CCDC102BQ68D86 513 aa20.63■□□□□ 0.89
HDDC3-206ENST00000561036 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
HDDC3-206ENST00000561036 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
HDDC3-206ENST00000561036 HELBQ8NG08 1087 aaPredicted RBP20.63■□□□□ 0.89
HDDC3-206ENST00000561036 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
HDDC3-206ENST00000561036 ST18O60284 1047 aa20.62■□□□□ 0.89
HDDC3-206ENST00000561036 SERPINB2P05120 415 aa20.62■□□□□ 0.89
HDDC3-206ENST00000561036 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.89
HDDC3-206ENST00000561036 TTF1Q15361 905 aaPredicted RBP20.62■□□□□ 0.89
HDDC3-206ENST00000561036 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
HDDC3-206ENST00000561036 KCNB2Q92953 911 aa20.62■□□□□ 0.89
HDDC3-206ENST00000561036 ANKRD2Q9GZV1 360 aa20.62■□□□□ 0.89
HDDC3-206ENST00000561036 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
HDDC3-206ENST00000561036 TAF5LO75529 589 aa20.61■□□□□ 0.89
HDDC3-206ENST00000561036 ZMYM1Q5SVZ6 1142 aa20.61■□□□□ 0.89
HDDC3-206ENST00000561036 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
HDDC3-206ENST00000561036 MAP4K1Q92918 833 aa20.61■□□□□ 0.89
HDDC3-206ENST00000561036 MINPP1Q9UNW1 487 aa20.61■□□□□ 0.89
HDDC3-206ENST00000561036 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
HDDC3-206ENST00000561036 MCAMP43121 646 aa20.6■□□□□ 0.89
HDDC3-206ENST00000561036 SCARF1Q14162 830 aa20.6■□□□□ 0.89
HDDC3-206ENST00000561036 ZSCAN25Q6NSZ9 544 aa20.6■□□□□ 0.89
HDDC3-206ENST00000561036 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
HDDC3-206ENST00000561036 COL4A1P02462 1669 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
HDDC3-206ENST00000561036 ZAP70P43403 619 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 PHKA1P46020 1223 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms