RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 WDR4P57081 412 aaKnown RBP7.15□□□□□ -1.26
ZEB1-220ENST00000560909 CALD1Q05682 793 aaKnown RBP7.15□□□□□ -1.26
ZEB1-220ENST00000560909 NNTQ13423 1086 aa7.15□□□□□ -1.26
ZEB1-220ENST00000560909 C1orf141Q5JVX7 400 aa7.15□□□□□ -1.26
ZEB1-220ENST00000560909 SEPT12Q8IYM1 358 aa7.15□□□□□ -1.26
ZEB1-220ENST00000560909 LGR6Q9HBX8 967 aa7.15□□□□□ -1.26
ZEB1-220ENST00000560909 IFT57Q9NWB7 429 aa7.15□□□□□ -1.26
ZEB1-220ENST00000560909 DNMT3LQ9UJW3 386 aa7.15□□□□□ -1.26
ZEB1-220ENST00000560909 MRC1P22897 1456 aa7.15□□□□□ -1.27
ZEB1-220ENST00000560909 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 RXRBP28702 533 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 DCTN1Q14203 1278 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 TAF7Q15545 349 aaPredicted RBP7.14□□□□□ -1.27
ZEB1-220ENST00000560909 NEUROD2Q15784 382 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 DUSP27Q5VZP5 1158 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 MPRIPQ6WCQ1 1025 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 MCM10Q7L590 875 aa7.14□□□□□ -1.27
ZEB1-220ENST00000560909 RTF1Q92541 710 aaKnown RBP7.14□□□□□ -1.27
ZEB1-220ENST00000560909 PARP4Q9UKK3 1724 aaKnown RBP7.14□□□□□ -1.27
ZEB1-220ENST00000560909 CCDC9Q9Y3X0 531 aaKnown RBP7.14□□□□□ -1.27
ZEB1-220ENST00000560909 HEG1Q9ULI3 1381 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 ADH1CP00326 375 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 GNAI1P63096 354 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 PLCB2Q00722 1185 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 FAM161AQ3B820 660 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 DDX54Q8TDD1 881 aaKnown RBP7.13□□□□□ -1.27
ZEB1-220ENST00000560909 THUMPD2Q9BTF0 503 aaKnown RBP7.13□□□□□ -1.27
ZEB1-220ENST00000560909 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 SHANK3Q9BYB0 1731 aa7.13□□□□□ -1.27
ZEB1-220ENST00000560909 LRRC37A3O60309 1634 aa7.12□□□□□ -1.27
ZEB1-220ENST00000560909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
ZEB1-220ENST00000560909 TSHZ2Q9NRE2 1034 aa7.12□□□□□ -1.27
ZEB1-220ENST00000560909 WNK3Q9BYP7 1800 aa7.12□□□□□ -1.27
ZEB1-220ENST00000560909 SOS1Q07889 1333 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-220ENST00000560909 CT47B1P0C2W7 299 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-220ENST00000560909 KRT27Q7Z3Y8 459 aa7.11□□□□□ -1.27
ZEB1-220ENST00000560909 NFATC2IPQ8NCF5 419 aa7.11□□□□□ -1.27
ZEB1-220ENST00000560909 PIGBQ92521 554 aa7.11□□□□□ -1.27
ZEB1-220ENST00000560909 MYH16Q9H6N6 1097 aa7.11□□□□□ -1.27
ZEB1-220ENST00000560909 MBIPQ9NS73 344 aa7.11□□□□□ -1.27
ZEB1-220ENST00000560909 TLL2Q9Y6L7 1015 aa7.11□□□□□ -1.27
ZEB1-220ENST00000560909 RGS12O14924 1447 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 FANCIQ9NVI1 1328 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 DLG5Q8TDM6 1919 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 SENP3-EIF4A1A0A087X0R7 540 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 DXOO77932 396 aaKnown RBP7.1□□□□□ -1.27
ZEB1-220ENST00000560909 HOXB7P09629 217 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 EIF4A1P60842 406 aaKnown RBP7.1□□□□□ -1.27
ZEB1-220ENST00000560909 PTSQ03393 145 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 TEFQ10587 303 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 FAM196AQ6ZSG2 479 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 VWA5B2Q8N398 1253 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 YTHDC1Q96MU7 727 aaKnown RBP7.1□□□□□ -1.27
ZEB1-220ENST00000560909 SEMA6BQ9H3T3 888 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 EP400Q96L91 3159 aa7.1□□□□□ -1.27
ZEB1-220ENST00000560909 VAMP4O75379 141 aa7.09□□□□□ -1.27
ZEB1-220ENST00000560909 BMP2P12643 396 aa7.09□□□□□ -1.27
ZEB1-220ENST00000560909 BRPF1P55201 1214 aaPredicted RBP7.09□□□□□ -1.27
ZEB1-220ENST00000560909 CABP4P57796 275 aa7.09□□□□□ -1.27
ZEB1-220ENST00000560909 ZNF790Q6PG37 636 aa7.09□□□□□ -1.27
ZEB1-220ENST00000560909 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
ZEB1-220ENST00000560909 ATG3Q9NT62 314 aa7.09□□□□□ -1.27
ZEB1-220ENST00000560909 SCN11AQ9UI33 1791 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 CDC14CA4D256 554 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 KCNQ3O43525 872 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 KCNQ2O43526 872 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-220ENST00000560909 VSIG10Q8N0Z9 540 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 C8orf58Q8NAV2 365 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 TSR2Q969E8 191 aaKnown RBP7.08□□□□□ -1.28
ZEB1-220ENST00000560909 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 MIS18AQ9NYP9 233 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 TSPYL4Q9UJ04 414 aa7.08□□□□□ -1.28
ZEB1-220ENST00000560909 SIPA1L3O60292 1781 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-220ENST00000560909 TOGARAM1Q9Y4F4 1720 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 RNF123Q5XPI4 1314 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
ZEB1-220ENST00000560909 EXOSC9Q06265 439 aaKnown RBP7.07□□□□□ -1.28
ZEB1-220ENST00000560909 PTF1AQ7RTS3 328 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 NBPF11Q86T75 865 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 CCDC155Q8N6L0 562 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 TSPYL6Q8N831 410 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 ARHGEF1Q92888 912 aaKnown RBP7.07□□□□□ -1.28
ZEB1-220ENST00000560909 SMARCC1Q92922 1105 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-220ENST00000560909 ZNF496Q96IT1 587 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-220ENST00000560909 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-220ENST00000560909 ZFP64Q9NPA5 681 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 ASAP1Q9ULH1 1129 aa7.07□□□□□ -1.28
ZEB1-220ENST00000560909 PLSCR1O15162 318 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 SNRPA1P09661 255 aaKnown RBP7.06□□□□□ -1.28
ZEB1-220ENST00000560909 RARSP54136 660 aaKnown RBP7.06□□□□□ -1.28
ZEB1-220ENST00000560909 SLC39A6Q13433 755 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 LAMC2Q13753 1193 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.06□□□□□ -1.28
ZEB1-220ENST00000560909 ALDH1L2Q3SY69 923 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 RDH13Q8NBN7 331 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 NEDD1Q8NHV4 660 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms