RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 SUCLG2Q96I99 432 aa8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 DDX19BQ9UMR2 479 aa8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 LTBP1Q14766 1721 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 IRS4O14654 1257 aaPredicted RBP8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 POLD1P28340 1107 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 ST5P78524 1137 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 EPHA10Q5JZY3 1008 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 PLA2G12BQ9BX93 195 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 SPON1Q9HCB6 807 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 PCDHB8Q9UN66 801 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 PCDHB13Q9Y5F0 798 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 SRCAPQ6ZRS2 3230 aa8.85□□□□□ -0.99
CTDSPL2-210ENST00000560834 GNAI3P08754 354 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 UBTFL1P0CB47 393 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 CTSWP56202 376 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 FOXO4P98177 505 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 RABL6Q3YEC7 729 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 CRY2Q49AN0 593 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 TPTE2Q6XPS3 522 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 ANKRD44Q8N8A2 993 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 ZBTB40Q9NUA8 1239 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 C9orf78Q9NZ63 289 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 ARFGEF1Q9Y6D6 1849 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 RTL9Q8NET4 1388 aa8.84□□□□□ -0.99
CTDSPL2-210ENST00000560834 GOLGB1Q14789 3259 aaKnown RBP8.83□□□□□ -1
CTDSPL2-210ENST00000560834 KLRG2A4D1S0 409 aaPredicted RBP8.83□□□□□ -1
CTDSPL2-210ENST00000560834 PDE8AO60658 829 aa8.83□□□□□ -1
CTDSPL2-210ENST00000560834 IER5LQ5T953 404 aa8.83□□□□□ -1
CTDSPL2-210ENST00000560834 EXOC6Q8TAG9 804 aa8.83□□□□□ -1
CTDSPL2-210ENST00000560834 BRIP1Q9BX63 1249 aa8.83□□□□□ -1
CTDSPL2-210ENST00000560834 BICC1Q9H694 974 aaKnown RBP8.83□□□□□ -1
CTDSPL2-210ENST00000560834 ARAP2Q8WZ64 1704 aa8.83□□□□□ -1
CTDSPL2-210ENST00000560834 SLX4Q8IY92 1834 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 NPHP1O15259 732 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 GNAI2P04899 355 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 CSF1RP07333 972 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
CTDSPL2-210ENST00000560834 PSEN1P49768 467 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 EMP3P54852 163 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 SF3B3Q15393 1217 aaKnown RBP8.82□□□□□ -1
CTDSPL2-210ENST00000560834 FAM161AQ3B820 660 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 DUOX1Q9NRD9 1551 aa8.82□□□□□ -1
CTDSPL2-210ENST00000560834 SNED1Q8TER0 1413 aa8.81□□□□□ -1
CTDSPL2-210ENST00000560834 MTX1Q13505 466 aa8.81□□□□□ -1
CTDSPL2-210ENST00000560834 CEP85Q6P2H3 762 aa8.81□□□□□ -1
CTDSPL2-210ENST00000560834 TTLL11Q8NHH1 800 aa8.81□□□□□ -1
CTDSPL2-210ENST00000560834 GREM2Q9H772 168 aa8.81□□□□□ -1
CTDSPL2-210ENST00000560834 PNMA6EA0A0J9YXQ4 647 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 SRGNP10124 158 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
CTDSPL2-210ENST00000560834 CHRNA5P30532 468 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 PDE6BP35913 854 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 RFX5P48382 616 aaPredicted RBP8.8□□□□□ -1
CTDSPL2-210ENST00000560834 LMBR1LQ6UX01 489 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 SLC51AQ86UW1 340 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 NLGN2Q8NFZ4 835 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 NLRP3Q96P20 1036 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 CCDC85AQ96PX6 553 aaPredicted RBP8.8□□□□□ -1
CTDSPL2-210ENST00000560834 CD2APQ9Y5K6 639 aa8.8□□□□□ -1
CTDSPL2-210ENST00000560834 FER1L6Q2WGJ9 1857 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 KCNA3P22001 575 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 HOXA10P31260 410 aaPredicted RBP8.79□□□□□ -1
CTDSPL2-210ENST00000560834 CCDC152Q4G0S7 254 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 C2CD5Q86YS7 1000 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 SIRT2Q8IXJ6 389 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
CTDSPL2-210ENST00000560834 MFRPQ9BY79 579 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
CTDSPL2-210ENST00000560834 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
CTDSPL2-210ENST00000560834 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 PCDHB15Q9Y5E8 787 aa8.79□□□□□ -1
CTDSPL2-210ENST00000560834 NPR1P16066 1061 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 DPEP1P16444 411 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 ITGA6P23229 1130 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 TGFB2P61812 414 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 GRAPQ13588 217 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 AAMPQ13685 434 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 STYK1Q6J9G0 422 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 GRAPLQ8TC17 118 aaPredicted RBP8.78□□□□□ -1
CTDSPL2-210ENST00000560834 SSH3Q8TE77 659 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 RPGRQ92834 1020 aaKnown RBP8.78□□□□□ -1
CTDSPL2-210ENST00000560834 CELF1Q92879 486 aaKnown RBP8.78□□□□□ -1
CTDSPL2-210ENST00000560834 KIF12Q96FN5 646 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 MASTLQ96GX5 879 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 HDAC5Q9UQL6 1122 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 TRPC6Q9Y210 931 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 CHMP3Q9Y3E7 222 aa8.78□□□□□ -1
CTDSPL2-210ENST00000560834 A0A0G2JLW4 131 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 H0YIN7 160 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 SRGAP3O43295 1099 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 NEFLP07196 543 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 ATP8B2P98198 1209 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 DDX46Q7L014 1031 aaKnown RBP8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 IFNL1Q8IU54 200 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms