RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 U2AF1Q01081 240 aaKnown RBP eCLIP9.86□□□□□ -0.83
APH1B-209ENST00000560716 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
APH1B-209ENST00000560716 PODXL2Q9NZ53 605 aa9.86□□□□□ -0.83
APH1B-209ENST00000560716 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
APH1B-209ENST00000560716 COL4A1P02462 1669 aa9.86□□□□□ -0.83
APH1B-209ENST00000560716 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 TCERG1O14776 1098 aaKnown RBP9.85□□□□□ -0.83
APH1B-209ENST00000560716 MYL6BP14649 208 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 PPP2R1AP30153 589 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 TCIRG1Q13488 830 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 FBXO46Q6PJ61 603 aaPredicted RBP9.85□□□□□ -0.83
APH1B-209ENST00000560716 DLK2Q6UY11 383 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 NGEFQ8N5V2 710 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 HTTP42858 3142 aa9.85□□□□□ -0.83
APH1B-209ENST00000560716 ECM29Q5VYK3 1845 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 ADM5C9JUS6 153 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 MMP14P50281 582 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 NFE2L2Q16236 605 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 KIF4BQ2VIQ3 1234 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 TBC1D10BQ4KMP7 808 aaPredicted RBP9.84□□□□□ -0.83
APH1B-209ENST00000560716 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 AGBL3Q8NEM8 1001 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 CDCA5Q96FF9 252 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 GMLQ99445 158 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 EYA3Q99504 573 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 POLLQ9UGP5 575 aa9.84□□□□□ -0.83
APH1B-209ENST00000560716 MKI67P46013 3256 aaKnown RBP9.83□□□□□ -0.84
APH1B-209ENST00000560716 ECE2O60344 883 aa9.83□□□□□ -0.84
APH1B-209ENST00000560716 TRIM28Q13263 835 aaKnown RBP9.83□□□□□ -0.84
APH1B-209ENST00000560716 ZNF296Q8WUU4 475 aaPredicted RBP9.83□□□□□ -0.84
APH1B-209ENST00000560716 ISCA1Q9BUE6 129 aa9.83□□□□□ -0.84
APH1B-209ENST00000560716 MYH3P11055 1940 aa9.82□□□□□ -0.84
APH1B-209ENST00000560716 GPR25O00155 361 aa9.82□□□□□ -0.84
APH1B-209ENST00000560716 HCLS1P14317 486 aaPredicted RBP9.82□□□□□ -0.84
APH1B-209ENST00000560716 HABP4Q5JVS0 413 aaKnown RBP9.82□□□□□ -0.84
APH1B-209ENST00000560716 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
APH1B-209ENST00000560716 TBC1D16Q8TBP0 767 aa9.82□□□□□ -0.84
APH1B-209ENST00000560716 GGA3Q9NZ52 723 aa9.82□□□□□ -0.84
APH1B-209ENST00000560716 FBXO3Q9UK99 471 aa9.82□□□□□ -0.84
APH1B-209ENST00000560716 DSG3P32926 999 aa9.81□□□□□ -0.84
APH1B-209ENST00000560716 GPSM2P81274 684 aa9.81□□□□□ -0.84
APH1B-209ENST00000560716 PROSER3Q2NL68 480 aa9.81□□□□□ -0.84
APH1B-209ENST00000560716 RSBN1LQ6PCB5 846 aaPredicted RBP9.81□□□□□ -0.84
APH1B-209ENST00000560716 COPS6Q7L5N1 327 aa9.81□□□□□ -0.84
APH1B-209ENST00000560716 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
APH1B-209ENST00000560716 DBNDD1Q9H9R9 158 aa9.81□□□□□ -0.84
APH1B-209ENST00000560716 KCNQ5Q9NR82 932 aa9.81□□□□□ -0.84
APH1B-209ENST00000560716 TRMT112Q9UI30 125 aaKnown RBP9.81□□□□□ -0.84
APH1B-209ENST00000560716 NSFL1CQ9UNZ2 370 aaKnown RBP9.81□□□□□ -0.84
APH1B-209ENST00000560716 NEFMP07197 916 aa9.8□□□□□ -0.84
APH1B-209ENST00000560716 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
APH1B-209ENST00000560716 THUMPD2Q9BTF0 503 aaKnown RBP9.8□□□□□ -0.84
APH1B-209ENST00000560716 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
APH1B-209ENST00000560716 ASTN2O75129 1339 aaPredicted RBP9.8□□□□□ -0.84
APH1B-209ENST00000560716 COL1A1P02452 1464 aaPredicted RBP9.79□□□□□ -0.84
APH1B-209ENST00000560716 UNCXA6NJT0 531 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 FKTNO75072 461 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 ALDH1A1P00352 501 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 HOXB7P09629 217 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 INHBEP58166 350 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 RPS8P62241 208 aaKnown RBP9.79□□□□□ -0.84
APH1B-209ENST00000560716 SREBF2Q12772 1141 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 SCARF1Q14162 830 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 ANGEL2Q5VTE6 544 aaKnown RBP9.79□□□□□ -0.84
APH1B-209ENST00000560716 PODNQ7Z5L7 613 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 ZC3H12CQ9C0D7 883 aaKnown RBP9.79□□□□□ -0.84
APH1B-209ENST00000560716 HDAC9Q9UKV0 1011 aa9.79□□□□□ -0.84
APH1B-209ENST00000560716 KIAA0100Q14667 2235 aaKnown RBP9.78□□□□□ -0.84
APH1B-209ENST00000560716 CENPFP49454 3210 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 TBC1D8O95759 1140 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 USP17L8P0C7I0 530 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 XAGE3Q8WTP9 111 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 MYOZ2Q9NPC6 264 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 TSPYL4Q9UJ04 414 aa9.78□□□□□ -0.84
APH1B-209ENST00000560716 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
APH1B-209ENST00000560716 HSP90B1P14625 803 aaKnown RBP9.77□□□□□ -0.85
APH1B-209ENST00000560716 FXR1P51114 621 aaKnown RBP eCLIP9.77□□□□□ -0.85
APH1B-209ENST00000560716 MAP3K11Q16584 847 aa9.77□□□□□ -0.85
APH1B-209ENST00000560716 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
APH1B-209ENST00000560716 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
APH1B-209ENST00000560716 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
APH1B-209ENST00000560716 BRCA2P51587 3418 aa9.76□□□□□ -0.85
APH1B-209ENST00000560716 CHL1O00533 1208 aa9.76□□□□□ -0.85
APH1B-209ENST00000560716 ANXA1P04083 346 aa9.76□□□□□ -0.85
APH1B-209ENST00000560716 EIF2S2P20042 333 aaKnown RBP9.76□□□□□ -0.85
APH1B-209ENST00000560716 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
APH1B-209ENST00000560716 IFNLR1Q8IU57 520 aaPredicted RBP9.76□□□□□ -0.85
APH1B-209ENST00000560716 FAM89AQ96GI7 184 aa9.76□□□□□ -0.85
APH1B-209ENST00000560716 ZBED3Q96IU2 234 aaPredicted RBP9.76□□□□□ -0.85
APH1B-209ENST00000560716 MYO3BQ8WXR4 1341 aa9.76□□□□□ -0.85
APH1B-209ENST00000560716 MED23Q9ULK4 1368 aa9.75□□□□□ -0.85
APH1B-209ENST00000560716 SPEF2Q9C093 1822 aa9.75□□□□□ -0.85
APH1B-209ENST00000560716 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
APH1B-209ENST00000560716 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
APH1B-209ENST00000560716 UBE2Q2LH0YL09 131 aa9.75□□□□□ -0.85
APH1B-209ENST00000560716 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms