RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 YDJCA8MPS7 323 aa13.7□□□□□ -0.22
CDC42BPB-207ENST00000560492 PSMD14O00487 310 aa13.7□□□□□ -0.22
CDC42BPB-207ENST00000560492 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-207ENST00000560492 C2orf69Q8N8R5 385 aa13.7□□□□□ -0.22
CDC42BPB-207ENST00000560492 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
CDC42BPB-207ENST00000560492 DUOX1Q9NRD9 1551 aa13.7□□□□□ -0.22
CDC42BPB-207ENST00000560492 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
CDC42BPB-207ENST00000560492 DLK2Q6UY11 383 aa13.69□□□□□ -0.22
CDC42BPB-207ENST00000560492 LRP10Q7Z4F1 713 aa13.69□□□□□ -0.22
CDC42BPB-207ENST00000560492 GBA2Q9HCG7 927 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPB-207ENST00000560492 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
CDC42BPB-207ENST00000560492 ADM5C9JUS6 153 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 ATP5J2-PTCD1G3V325 749 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 ECE2O60344 883 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 RGMBQ6NW40 437 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 EYA3Q99504 573 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
CDC42BPB-207ENST00000560492 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 TMPOP42166 694 aaKnown RBP13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 RGS19P49795 217 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 KRT24Q2M2I5 525 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 HDGFL1Q5TGJ6 251 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 DPF2Q92785 391 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
CDC42BPB-207ENST00000560492 GPSM2P81274 684 aa13.66□□□□□ -0.22
CDC42BPB-207ENST00000560492 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
CDC42BPB-207ENST00000560492 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
CDC42BPB-207ENST00000560492 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 TRPA1O75762 1119 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 EGFRP00533 1210 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 SOX10P56693 466 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 KIF23Q02241 960 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 GGA3Q9NZ52 723 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
CDC42BPB-207ENST00000560492 SCN9AQ15858 1988 aa13.64□□□□□ -0.23
CDC42BPB-207ENST00000560492 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPB-207ENST00000560492 UFL1O94874 794 aa13.64□□□□□ -0.23
CDC42BPB-207ENST00000560492 KCNQ5Q9NR82 932 aa13.64□□□□□ -0.23
CDC42BPB-207ENST00000560492 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
CDC42BPB-207ENST00000560492 SPEF2Q9C093 1822 aa13.63□□□□□ -0.23
CDC42BPB-207ENST00000560492 WDR43Q15061 677 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDC42BPB-207ENST00000560492 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
CDC42BPB-207ENST00000560492 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
CDC42BPB-207ENST00000560492 COL4A1P02462 1669 aa13.63□□□□□ -0.23
CDC42BPB-207ENST00000560492 FAM155AB1AL88 458 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 SAGE1Q9NXZ1 904 aa13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 GGA1Q9UJY5 639 aa13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPB-207ENST00000560492 RTL9Q8NET4 1388 aa13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 CDCA5Q96FF9 252 aa13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 RNF186Q9NXI6 227 aa13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 PSME4Q14997 1843 aa13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 ASTN2O75129 1339 aaPredicted RBP13.61□□□□□ -0.23
CDC42BPB-207ENST00000560492 CHL1O00533 1208 aa13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 SLC10A3P09131 477 aa13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 ANGEL2Q5VTE6 544 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
CDC42BPB-207ENST00000560492 PAPPA2Q9BXP8 1791 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 SCARF1Q14162 830 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 RALBP1Q15311 655 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 DUSP27Q5VZP5 1158 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 MYD88Q99836 296 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 PDE4DIPQ5VU43 2346 aa13.59□□□□□ -0.23
CDC42BPB-207ENST00000560492 VIL1P09327 827 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 HOXB7P09629 217 aa13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 CCDC152Q4G0S7 254 aa13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 CTU1Q7Z7A3 348 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 CSRNP1Q96S65 589 aa13.58□□□□□ -0.24
CDC42BPB-207ENST00000560492 MYH3P11055 1940 aa13.57□□□□□ -0.24
CDC42BPB-207ENST00000560492 RASAL3Q86YV0 1011 aa13.57□□□□□ -0.24
CDC42BPB-207ENST00000560492 ANKRD18AQ8IVF6 992 aa13.57□□□□□ -0.24
CDC42BPB-207ENST00000560492 ZBTB38Q8NAP3 1195 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-207ENST00000560492 SCAF8Q9UPN6 1271 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-207ENST00000560492 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms