RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 RIC1Q4ADV7 1423 aa28.66■■■□□ 2.18
PIF1-208ENST00000560444 FAM177BA6PVY3 158 aa28.66■■■□□ 2.18
PIF1-208ENST00000560444 ATP2B3Q16720 1220 aa28.66■■■□□ 2.18
PIF1-208ENST00000560444 MAP4K1Q92918 833 aa28.66■■■□□ 2.18
PIF1-208ENST00000560444 EDC3Q96F86 508 aaKnown RBP28.66■■■□□ 2.18
PIF1-208ENST00000560444 GNPATO15228 680 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 PDE8BO95263 885 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 VGLL2Q8N8G2 317 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 MED23Q9ULK4 1368 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 LY75O60449 1722 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 A0A0D9SFI3 127 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 ZPR1O75312 459 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 PTH1RQ03431 593 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 TTC39AQ5SRH9 613 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 SNX14Q9Y5W7 946 aa28.65■■■□□ 2.18
PIF1-208ENST00000560444 ZNF512BQ96KM6 892 aaPredicted RBP28.64■■■□□ 2.18
PIF1-208ENST00000560444 BCL2L12Q9HB09 334 aa28.64■■■□□ 2.18
PIF1-208ENST00000560444 NECTIN1Q15223 517 aa28.63■■■□□ 2.17
PIF1-208ENST00000560444 NYXQ9GZU5 481 aa28.63■■■□□ 2.17
PIF1-208ENST00000560444 GOLIM4O00461 696 aa28.62■■■□□ 2.17
PIF1-208ENST00000560444 LRRFIP1Q32MZ4 808 aaKnown RBP28.62■■■□□ 2.17
PIF1-208ENST00000560444 SLC10A5Q5PT55 438 aa28.62■■■□□ 2.17
PIF1-208ENST00000560444 USPL1Q5W0Q7 1092 aa28.62■■■□□ 2.17
PIF1-208ENST00000560444 DDX46Q7L014 1031 aaKnown RBP28.62■■■□□ 2.17
PIF1-208ENST00000560444 LRP5O75197 1615 aa28.62■■■□□ 2.17
PIF1-208ENST00000560444 HMGB2P26583 209 aaKnown RBP28.61■■■□□ 2.17
PIF1-208ENST00000560444 ADORA1P30542 326 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 MCMDC2Q4G0Z9 681 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 MPHOSPH8Q99549 860 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 SPEF2Q9C093 1822 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 SCN7AQ01118 1682 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 SF3B3Q15393 1217 aaKnown RBP28.61■■■□□ 2.17
PIF1-208ENST00000560444 HELLSQ9NRZ9 838 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 NDUFB9Q9Y6M9 179 aa28.61■■■□□ 2.17
PIF1-208ENST00000560444 IGHMBP2P38935 993 aaKnown RBP28.6■■■□□ 2.17
PIF1-208ENST00000560444 TBC1D9BQ66K14 1250 aa28.6■■■□□ 2.17
PIF1-208ENST00000560444 LPIN2Q92539 896 aa28.6■■■□□ 2.17
PIF1-208ENST00000560444 SETDB2Q96T68 719 aa28.6■■■□□ 2.17
PIF1-208ENST00000560444 TM6SF1Q9BZW5 370 aa28.6■■■□□ 2.17
PIF1-208ENST00000560444 LAMB2P55268 1798 aa28.6■■■□□ 2.17
PIF1-208ENST00000560444 ZKSCAN1P17029 563 aaPredicted RBP28.59■■■□□ 2.17
PIF1-208ENST00000560444 PUM3Q15397 648 aaKnown RBP28.59■■■□□ 2.17
PIF1-208ENST00000560444 ARHGEF1Q92888 912 aaKnown RBP28.59■■■□□ 2.17
PIF1-208ENST00000560444 CWC22Q9HCG8 908 aaKnown RBP28.59■■■□□ 2.17
PIF1-208ENST00000560444 RBM8AQ9Y5S9 174 aaKnown RBP28.59■■■□□ 2.17
PIF1-208ENST00000560444 DDX60Q8IY21 1712 aaKnown RBP28.59■■■□□ 2.17
PIF1-208ENST00000560444 TAF5LO75529 589 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 SSFA2P28290 1259 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 KCNJ4P48050 445 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 ERFEQ4G0M1 354 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 TRAPPC3LQ5T215 181 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 RNF20Q5VTR2 975 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 RASEFQ8IZ41 740 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 CDC5LQ99459 802 aaKnown RBP28.58■■■□□ 2.17
PIF1-208ENST00000560444 FGFR2P21802 821 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 SLC27A3Q5K4L6 730 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 SEC31BQ9NQW1 1179 aa28.58■■■□□ 2.17
PIF1-208ENST00000560444 ADRA2BP18089 450 aa28.57■■■□□ 2.16
PIF1-208ENST00000560444 PRPF40BQ6NWY9 871 aaKnown RBP28.57■■■□□ 2.16
PIF1-208ENST00000560444 RNF113AO15541 343 aaKnown RBP28.56■■■□□ 2.16
PIF1-208ENST00000560444 GTF2E1P29083 439 aaPredicted RBP28.56■■■□□ 2.16
PIF1-208ENST00000560444 CREB3L3Q68CJ9 461 aa28.56■■■□□ 2.16
PIF1-208ENST00000560444 ZNF589Q86UQ0 364 aaPredicted RBP28.56■■■□□ 2.16
PIF1-208ENST00000560444 SRP68Q9UHB9 627 aaKnown RBP28.56■■■□□ 2.16
PIF1-208ENST00000560444 ZFYP08048 801 aaPredicted RBP28.55■■■□□ 2.16
PIF1-208ENST00000560444 RFC4P35249 363 aa28.55■■■□□ 2.16
PIF1-208ENST00000560444 FKBP4Q02790 459 aaKnown RBP eCLIP28.55■■■□□ 2.16
PIF1-208ENST00000560444 ZMYM1Q5SVZ6 1142 aa28.55■■■□□ 2.16
PIF1-208ENST00000560444 HMG20BQ9P0W2 317 aa28.55■■■□□ 2.16
PIF1-208ENST00000560444 FRAT2O75474 233 aaPredicted RBP28.54■■■□□ 2.16
PIF1-208ENST00000560444 C4BP0C0L5 1744 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 UQCRFS1P1P0C7P4 283 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 TPTE2Q6XPS3 522 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 BICDL1Q6ZP65 573 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 TMX3Q96JJ7 454 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 UPF3BQ9BZI7 483 aaKnown RBP28.54■■■□□ 2.16
PIF1-208ENST00000560444 LRRC4BQ9NT99 713 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 TAF1LQ8IZX4 1826 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 EP400Q96L91 3159 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 APBA3O96018 575 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 SLC5A1P13866 664 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 TSGA10IPQ3SY00 556 aa28.54■■■□□ 2.16
PIF1-208ENST00000560444 PSMA5P28066 241 aa28.53■■■□□ 2.16
PIF1-208ENST00000560444 ZSWIM6Q9HCJ5 1215 aa28.53■■■□□ 2.16
PIF1-208ENST00000560444 U3KPZ7 1027 aaPredicted RBP28.53■■■□□ 2.16
PIF1-208ENST00000560444 SLC27A2O14975 620 aa28.52■■■□□ 2.16
PIF1-208ENST00000560444 CUL4AQ13619 759 aa28.52■■■□□ 2.16
PIF1-208ENST00000560444 SMIM5Q71RC9 77 aa28.52■■■□□ 2.16
PIF1-208ENST00000560444 NBPF5PQ86XG9 351 aaPredicted RBP28.52■■■□□ 2.16
PIF1-208ENST00000560444 TTC14Q96N46 770 aa28.52■■■□□ 2.16
PIF1-208ENST00000560444 FOXD4L1Q9NU39 408 aa28.52■■■□□ 2.16
PIF1-208ENST00000560444 ARID4AP29374 1257 aaPredicted RBP28.51■■■□□ 2.15
PIF1-208ENST00000560444 TTF1Q15361 905 aaPredicted RBP28.51■■■□□ 2.15
PIF1-208ENST00000560444 INTS4Q96HW7 963 aaKnown RBP28.51■■■□□ 2.15
PIF1-208ENST00000560444 ZAP70P43403 619 aa28.51■■■□□ 2.15
PIF1-208ENST00000560444 RAB3GAP1Q15042 981 aa28.51■■■□□ 2.15
PIF1-208ENST00000560444 CCDC102BQ68D86 513 aa28.51■■■□□ 2.15
PIF1-208ENST00000560444 NLRP3Q96P20 1036 aa28.51■■■□□ 2.15
PIF1-208ENST00000560444 SCARF1Q14162 830 aa28.5■■■□□ 2.15
PIF1-208ENST00000560444 VPS53Q5VIR6 699 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms