RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 EFCAB8A8MWE9 144 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 SARM1Q6SZW1 724 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 TADA2BQ86TJ2 420 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 MICALL1Q8N3F8 863 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 EPC1Q9H2F5 836 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 DACT1Q9NYF0 836 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 ABCC4O15439 1325 aa22.31■■□□□ 1.16
SEMA4B-215ENST00000560089 MRPL50Q8N5N7 158 aaKnown RBP22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 EVCP57679 992 aa22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 TRDNQ13061 729 aa22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 E4F1Q66K89 784 aaPredicted RBP22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 FCHSD2O94868 740 aa22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 HOMER1Q86YM7 354 aa22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 FUT8Q9BYC5 575 aa22.3■■□□□ 1.16
SEMA4B-215ENST00000560089 CARD6Q9BX69 1037 aa22.29■■□□□ 1.16
SEMA4B-215ENST00000560089 SRRTQ9BXP5 876 aaKnown RBP22.29■■□□□ 1.16
SEMA4B-215ENST00000560089 MST1RQ04912 1400 aa22.29■■□□□ 1.16
SEMA4B-215ENST00000560089 MSH6P52701 1360 aa22.29■■□□□ 1.16
SEMA4B-215ENST00000560089 ZNF428Q96B54 188 aa22.29■■□□□ 1.16
SEMA4B-215ENST00000560089 CWC27Q6UX04 472 aaKnown RBP22.28■■□□□ 1.16
SEMA4B-215ENST00000560089 DNAI1Q9UI46 699 aa22.28■■□□□ 1.16
SEMA4B-215ENST00000560089 TUBB4AP04350 444 aa22.28■■□□□ 1.16
SEMA4B-215ENST00000560089 FAM43BQ6ZT52 329 aaPredicted RBP22.27■■□□□ 1.16
SEMA4B-215ENST00000560089 TTC6Q86TZ1 520 aa22.27■■□□□ 1.16
SEMA4B-215ENST00000560089 CADPS2Q86UW7 1296 aa22.27■■□□□ 1.16
SEMA4B-215ENST00000560089 A0A087WUV0 522 aaPredicted RBP22.27■■□□□ 1.16
SEMA4B-215ENST00000560089 SMC2O95347 1197 aa22.27■■□□□ 1.16
SEMA4B-215ENST00000560089 URI1O94763 535 aaPredicted RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 GNL2Q13823 731 aaKnown RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 DDX19AQ9NUU7 478 aaKnown RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 MTMR6Q9Y217 621 aa22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 GOLGA6L4A6NEF3 574 aa22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 GSDMDP57764 484 aa22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 MARF1Q9Y4F3 1742 aaKnown RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 PSDA5PKW4 1024 aaPredicted RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 CALRP27797 417 aaKnown RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 RBM28Q9NW13 759 aaKnown RBP22.26■■□□□ 1.15
SEMA4B-215ENST00000560089 VPS37CA5D8V6 355 aaPredicted RBP22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 HOXC9P31274 260 aa22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 GPR161Q8N6U8 529 aaKnown RBP22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 CLSTN2Q9H4D0 955 aa22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 KRT85P78386 507 aa22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 USHBP1Q8N6Y0 703 aa22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 LARP6Q9BRS8 491 aaKnown RBP22.25■■□□□ 1.15
SEMA4B-215ENST00000560089 PHLPP2Q6ZVD8 1323 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 CAVIN2O95810 425 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 ETF1P62495 437 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 LRRFIP1Q32MZ4 808 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 CCDC30Q5VVM6 783 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 RBM43Q6ZSC3 357 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 ANKRD44Q8N8A2 993 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 FAM83GA6ND36 823 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 SCP2P22307 547 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 FLT4P35916 1363 aa22.24■■□□□ 1.15
SEMA4B-215ENST00000560089 USP8P40818 1118 aa22.23■■□□□ 1.15
SEMA4B-215ENST00000560089 BIRC2Q13490 618 aa22.23■■□□□ 1.15
SEMA4B-215ENST00000560089 SBNO1A3KN83 1393 aa22.23■■□□□ 1.15
SEMA4B-215ENST00000560089 IQCB1Q15051 598 aa22.23■■□□□ 1.15
SEMA4B-215ENST00000560089 MAP9Q49MG5 647 aa22.23■■□□□ 1.15
SEMA4B-215ENST00000560089 LRRC31Q6UY01 552 aa22.23■■□□□ 1.15
SEMA4B-215ENST00000560089 GCP02774 474 aa22.22■■□□□ 1.15
SEMA4B-215ENST00000560089 GJB2P29033 226 aa22.22■■□□□ 1.15
SEMA4B-215ENST00000560089 ZC3H6P61129 1189 aaKnown RBP22.22■■□□□ 1.15
SEMA4B-215ENST00000560089 LONRF2Q1L5Z9 754 aa22.22■■□□□ 1.15
SEMA4B-215ENST00000560089 EYA1Q99502 592 aa22.22■■□□□ 1.15
SEMA4B-215ENST00000560089 PDE11AQ9HCR9 933 aa22.22■■□□□ 1.15
SEMA4B-215ENST00000560089 ERLIN2O94905 339 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 GNAI3P08754 354 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 PDE1AP54750 535 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 PLEKHA4Q9H4M7 779 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 BECN2A8MW95 431 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 VAMP4O75379 141 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 SEMA3FQ13275 785 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 IL17RAQ96F46 866 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 PARD6BQ9BYG5 372 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 TTC41PQ6P2S7 1318 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 SRGAP3O43295 1099 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 DTNBO60941 627 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 LIMCH1Q9UPQ0 1083 aa22.21■■□□□ 1.15
SEMA4B-215ENST00000560089 HNRNPH1P31943 449 aaKnown RBP22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 APOBRQ0VD83 1088 aa22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 PLEKHO1Q53GL0 409 aaPredicted RBP22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 KAT2BQ92831 832 aa22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 API5Q9BZZ5 524 aaKnown RBP22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 AK2P54819 239 aa22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 BRINP3Q76B58 766 aa22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 GIMAP7Q8NHV1 300 aa22.2■■□□□ 1.14
SEMA4B-215ENST00000560089 NFE2L2Q16236 605 aa22.19■■□□□ 1.14
SEMA4B-215ENST00000560089 RPAP2Q8IXW5 612 aaPredicted RBP22.19■■□□□ 1.14
SEMA4B-215ENST00000560089 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
SEMA4B-215ENST00000560089 AKAP2Q9Y2D5 859 aa22.19■■□□□ 1.14
SEMA4B-215ENST00000560089 FAN1Q9Y2M0 1017 aa22.19■■□□□ 1.14
SEMA4B-215ENST00000560089 MAP2K7O14733 419 aa22.18■■□□□ 1.14
SEMA4B-215ENST00000560089 MCM6Q14566 821 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms