RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 UTYO14607 1347 aa11.35□□□□□ -0.59
SEMA4B-214ENST00000560003 XDHP47989 1333 aa11.35□□□□□ -0.59
SEMA4B-214ENST00000560003 ANKRD36CQ5JPF3 1778 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 KIF3CO14782 793 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 GPSM2P81274 684 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 FOXO4P98177 505 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 FSTL1Q12841 308 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 AOC3Q16853 763 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 NMRK2Q9NPI5 230 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 MINPP1Q9UNW1 487 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 CACNA1FO60840 1977 aa11.34□□□□□ -0.59
SEMA4B-214ENST00000560003 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.59
SEMA4B-214ENST00000560003 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 UFL1O94874 794 aa11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 MS4A1P11836 297 aa11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
SEMA4B-214ENST00000560003 GNAI3P08754 354 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 UBTFL1P0CB47 393 aaPredicted RBP11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 KCNJ4P48050 445 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 ATF7IPQ6VMQ6 1270 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 SMC1BQ8NDV3 1235 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 CNNM1Q9NRU3 951 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 HACL1Q9UJ83 578 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 TNRC6CQ9HCJ0 1690 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-214ENST00000560003 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
SEMA4B-214ENST00000560003 INTS3Q68E01 1043 aaKnown RBP11.31□□□□□ -0.6
SEMA4B-214ENST00000560003 CIAPIN1Q6FI81 312 aa11.31□□□□□ -0.6
SEMA4B-214ENST00000560003 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
SEMA4B-214ENST00000560003 BCAR3O75815 825 aa11.3□□□□□ -0.6
SEMA4B-214ENST00000560003 CXCL9Q07325 125 aa11.3□□□□□ -0.6
SEMA4B-214ENST00000560003 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
SEMA4B-214ENST00000560003 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
SEMA4B-214ENST00000560003 FTSJ3Q8IY81 847 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-214ENST00000560003 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
SEMA4B-214ENST00000560003 H7C1D1 291 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 RPS12P25398 132 aaKnown RBP11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 MMP14P50281 582 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 CHRNDQ07001 517 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 DPF2Q92785 391 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 TAF1DQ9H5J8 278 aaPredicted RBP11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 ZNF804BA4D1E1 1349 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
SEMA4B-214ENST00000560003 ECE2O60344 883 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 RAD17O75943 681 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 TRIM27P14373 513 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 EPHX2P34913 555 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 POLA2Q14181 598 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 LDHDQ86WU2 507 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
SEMA4B-214ENST00000560003 POTECB2RU33 542 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 CAPN15O75808 1086 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 GNAI2P04899 355 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 DZIP1LQ8IYY4 767 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 KAZALD1Q96I82 304 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 DBNDD1Q9H9R9 158 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
SEMA4B-214ENST00000560003 SBF1O95248 1867 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 USP17L3A6NCW0 530 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 USP17L4A6NCW7 530 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 PLIN1O60240 522 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 VIL1P09327 827 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 HSPA6P17066 643 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 APLP1P51693 650 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 UBE4AQ14139 1066 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 EAPPQ56P03 285 aaPredicted RBP11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 C15orf52Q6ZUT6 534 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 ZNF804AQ7Z570 1209 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 RCAN3Q9UKA8 241 aa11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-214ENST00000560003 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
SEMA4B-214ENST00000560003 SLC51AQ86UW1 340 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms