RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
CHRNB4-204ENST00000559849 EYA3Q99504 573 aa17.17■□□□□ 0.34
CHRNB4-204ENST00000559849 NIM1KQ8IY84 436 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 SPEF2Q9C093 1822 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 DUOX1Q9NRD9 1551 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 EIF6P56537 245 aaKnown RBP17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 NMRK2Q9NPI5 230 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
CHRNB4-204ENST00000559849 DDNO94850 711 aaPredicted RBP17.15■□□□□ 0.34
CHRNB4-204ENST00000559849 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
CHRNB4-204ENST00000559849 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
CHRNB4-204ENST00000559849 ANKRD2Q9GZV1 360 aa17.15■□□□□ 0.34
CHRNB4-204ENST00000559849 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
CHRNB4-204ENST00000559849 RCAN3Q9UKA8 241 aa17.15■□□□□ 0.34
CHRNB4-204ENST00000559849 LTBP1Q14766 1721 aa17.14■□□□□ 0.34
CHRNB4-204ENST00000559849 UFL1O94874 794 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 GNAI3P08754 354 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 COL4A5P29400 1685 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 MEIS3Q99687 375 aa17.14■□□□□ 0.33
CHRNB4-204ENST00000559849 KIF3CO14782 793 aa17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 RIMBP2O15034 1052 aa17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 GPC2Q8N158 579 aa17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 ZNF541Q9H0D2 1346 aa17.13■□□□□ 0.33
CHRNB4-204ENST00000559849 CHRNDQ07001 517 aa17.12■□□□□ 0.33
CHRNB4-204ENST00000559849 TMEM57Q8N5G2 664 aa17.12■□□□□ 0.33
CHRNB4-204ENST00000559849 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
CHRNB4-204ENST00000559849 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
CHRNB4-204ENST00000559849 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
CHRNB4-204ENST00000559849 G3V3G9 751 aa17.11■□□□□ 0.33
CHRNB4-204ENST00000559849 MS4A1P11836 297 aa17.11■□□□□ 0.33
CHRNB4-204ENST00000559849 DCAF8Q5TAQ9 597 aa17.11■□□□□ 0.33
CHRNB4-204ENST00000559849 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
CHRNB4-204ENST00000559849 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
CHRNB4-204ENST00000559849 POTECB2RU33 542 aa17.1■□□□□ 0.33
CHRNB4-204ENST00000559849 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
CHRNB4-204ENST00000559849 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
CHRNB4-204ENST00000559849 GJA3Q9Y6H8 435 aa17.1■□□□□ 0.33
CHRNB4-204ENST00000559849 ZNF804BA4D1E1 1349 aa17.1■□□□□ 0.33
CHRNB4-204ENST00000559849 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 WTIPA6NIX2 430 aaPredicted RBP17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 CXCL9Q07325 125 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 TOMM70O94826 608 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 RLBP1P12271 317 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 TNIP1Q15025 636 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
CHRNB4-204ENST00000559849 YDJCA8MPS7 323 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 TAF5LO75529 589 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 GNAI2P04899 355 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 KCNJ4P48050 445 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 ITPRIPQ8IWB1 547 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 PUS3Q9BZE2 481 aaKnown RBP17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 RIPOR2Q9Y4F9 1068 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 MED23Q9ULK4 1368 aa17.08■□□□□ 0.33
CHRNB4-204ENST00000559849 ECE2O60344 883 aa17.08■□□□□ 0.32
CHRNB4-204ENST00000559849 RAD17O75943 681 aa17.08■□□□□ 0.32
CHRNB4-204ENST00000559849 SCN4AP35499 1836 aa17.07■□□□□ 0.32
CHRNB4-204ENST00000559849 PLIN1O60240 522 aa17.07■□□□□ 0.32
CHRNB4-204ENST00000559849 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
CHRNB4-204ENST00000559849 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
CHRNB4-204ENST00000559849 MROH5Q6ZUA9 1318 aa17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 C1QTNF8P60827 252 aa17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 PODNQ7Z5L7 613 aa17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
CHRNB4-204ENST00000559849 MTX1Q13505 466 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 TXNRD3Q86VQ6 643 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 SNAP23O00161 211 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 EYA2O00167 538 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 C15orf52Q6ZUT6 534 aaKnown RBP17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 RBM46Q8TBY0 533 aaKnown RBP17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 KCNQ5Q9NR82 932 aa17.05■□□□□ 0.32
CHRNB4-204ENST00000559849 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
CHRNB4-204ENST00000559849 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
CHRNB4-204ENST00000559849 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
CHRNB4-204ENST00000559849 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
CHRNB4-204ENST00000559849 PSMD14O00487 310 aa17.03■□□□□ 0.32
CHRNB4-204ENST00000559849 SCNN1DP51172 638 aa17.03■□□□□ 0.32
CHRNB4-204ENST00000559849 A0A1B0GUL6 1792 aa17.03■□□□□ 0.32
CHRNB4-204ENST00000559849 PDE8BO95263 885 aa17.03■□□□□ 0.32
CHRNB4-204ENST00000559849 KLRK1P26718 216 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms