RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 GRIK4Q16099 956 aa7.38□□□□□ -1.23
SPG11-218ENST00000559754 GRIK5Q16478 980 aa7.38□□□□□ -1.23
SPG11-218ENST00000559754 PDE12Q6L8Q7 609 aaKnown RBP7.38□□□□□ -1.23
SPG11-218ENST00000559754 GTF3C2Q8WUA4 911 aaPredicted RBP7.38□□□□□ -1.23
SPG11-218ENST00000559754 NUDT16Q96DE0 195 aaKnown RBP7.38□□□□□ -1.23
SPG11-218ENST00000559754 SPACA7Q96KW9 195 aa7.38□□□□□ -1.23
SPG11-218ENST00000559754 ABI2Q9NYB9 513 aaPredicted RBP7.38□□□□□ -1.23
SPG11-218ENST00000559754 K7ELQ4 463 aaPredicted RBP7.37□□□□□ -1.23
SPG11-218ENST00000559754 ILDR2Q71H61 639 aa7.37□□□□□ -1.23
SPG11-218ENST00000559754 LENG1Q96BZ8 264 aaPredicted RBP7.37□□□□□ -1.23
SPG11-218ENST00000559754 SCNN1AP37088 669 aa7.36□□□□□ -1.23
SPG11-218ENST00000559754 SF3B2Q13435 895 aaKnown RBP7.36□□□□□ -1.23
SPG11-218ENST00000559754 ZNF438Q7Z4V0 828 aa7.36□□□□□ -1.23
SPG11-218ENST00000559754 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
SPG11-218ENST00000559754 FAM13AO94988 1023 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 FURINP09958 794 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 MPSTP25325 297 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 MZF1P28698 734 aaPredicted RBP7.35□□□□□ -1.23
SPG11-218ENST00000559754 PDE4CQ08493 712 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 FBXO11Q86XK2 927 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 EDEM1Q92611 657 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 ELP3Q9H9T3 547 aa7.35□□□□□ -1.23
SPG11-218ENST00000559754 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
SPG11-218ENST00000559754 SELPP16109 830 aa7.34□□□□□ -1.23
SPG11-218ENST00000559754 NPR3P17342 541 aa7.34□□□□□ -1.23
SPG11-218ENST00000559754 EIF1AXP47813 144 aaKnown RBP7.34□□□□□ -1.23
SPG11-218ENST00000559754 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
SPG11-218ENST00000559754 DOC2BQ14184 412 aa7.34□□□□□ -1.23
SPG11-218ENST00000559754 ADGRE1Q14246 886 aa7.34□□□□□ -1.23
SPG11-218ENST00000559754 XKR5Q6UX68 686 aa7.34□□□□□ -1.23
SPG11-218ENST00000559754 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
SPG11-218ENST00000559754 SMNDC1O75940 238 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPG11-218ENST00000559754 KIF4AO95239 1232 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 PDGFAP04085 211 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 USP5P45974 858 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 AAMPQ13685 434 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 GDF6Q6KF10 455 aaPredicted RBP7.33□□□□□ -1.24
SPG11-218ENST00000559754 TXNRD3Q86VQ6 643 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 IL22RA1Q8N6P7 574 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 USP21Q9UK80 565 aa7.33□□□□□ -1.24
SPG11-218ENST00000559754 SUPT5HO00267 1087 aaKnown RBP7.32□□□□□ -1.24
SPG11-218ENST00000559754 FKBP4Q02790 459 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPG11-218ENST00000559754 EHHADHQ08426 723 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 MBTPS1Q14703 1052 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 C8orf34Q49A92 452 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 PHLDB3Q6NSJ2 640 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 IGF2-ASQ6U949 168 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 NCAPG2Q86XI2 1143 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 PMEPA1Q969W9 287 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 ARID3AQ99856 593 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 TMEM63CQ9P1W3 806 aa7.32□□□□□ -1.24
SPG11-218ENST00000559754 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
SPG11-218ENST00000559754 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
SPG11-218ENST00000559754 ABL1P00519 1130 aa7.31□□□□□ -1.24
SPG11-218ENST00000559754 COL13A1Q5TAT6 717 aaPredicted RBP7.31□□□□□ -1.24
SPG11-218ENST00000559754 CEP135Q66GS9 1140 aa7.31□□□□□ -1.24
SPG11-218ENST00000559754 SHISA2Q6UWI4 295 aa7.31□□□□□ -1.24
SPG11-218ENST00000559754 EGFL7Q9UHF1 273 aa7.31□□□□□ -1.24
SPG11-218ENST00000559754 CES1P23141 567 aa7.3□□□□□ -1.24
SPG11-218ENST00000559754 MTMR3Q13615 1198 aa7.3□□□□□ -1.24
SPG11-218ENST00000559754 TPSG1Q9NRR2 321 aa7.3□□□□□ -1.24
SPG11-218ENST00000559754 POLIQ9UNA4 740 aa7.3□□□□□ -1.24
SPG11-218ENST00000559754 TRIM33Q9UPN9 1127 aa7.3□□□□□ -1.24
SPG11-218ENST00000559754 PPME1Q9Y570 386 aa7.3□□□□□ -1.24
SPG11-218ENST00000559754 ATP11AP98196 1134 aa7.29□□□□□ -1.24
SPG11-218ENST00000559754 CEP120Q8N960 986 aa7.29□□□□□ -1.24
SPG11-218ENST00000559754 PBX4Q9BYU1 374 aa7.29□□□□□ -1.24
SPG11-218ENST00000559754 GGNBP2Q9H3C7 697 aa7.29□□□□□ -1.24
SPG11-218ENST00000559754 DLL1O00548 723 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 DEAF1O75398 565 aaPredicted RBP7.28□□□□□ -1.24
SPG11-218ENST00000559754 CYP2E1P05181 493 aaPredicted RBP7.28□□□□□ -1.24
SPG11-218ENST00000559754 CDC27P30260 824 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 C1orf127Q8N9H9 656 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 MRPL18Q9H0U6 180 aaKnown RBP7.28□□□□□ -1.24
SPG11-218ENST00000559754 RASSF4Q9H2L5 321 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 SEMA6BQ9H3T3 888 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 CNTN3Q9P232 1028 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 SALL4Q9UJQ4 1053 aa7.28□□□□□ -1.24
SPG11-218ENST00000559754 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 PTPRAP18433 802 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 RSPO4Q2I0M5 234 aaPredicted RBP7.27□□□□□ -1.25
SPG11-218ENST00000559754 NKAPLQ5M9Q1 402 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 FAM117BQ6P1L5 589 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 KANSL3Q9P2N6 904 aa7.27□□□□□ -1.25
SPG11-218ENST00000559754 ICMTO60725 284 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 PHACTR2O75167 634 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
SPG11-218ENST00000559754 SNX29Q8TEQ0 813 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 ANO2Q9NQ90 1003 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 TIMELESSQ9UNS1 1208 aa7.26□□□□□ -1.25
SPG11-218ENST00000559754 A6NHS1 94 aa7.25□□□□□ -1.25
SPG11-218ENST00000559754 LINC01387J3KSC0 135 aa7.25□□□□□ -1.25
SPG11-218ENST00000559754 FZD6O60353 706 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms