RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 AK9Q5TCS8 1911 aa21.27■■□□□ 1
CHRNA3-206ENST00000559658 METTL24Q5JXM2 366 aa21.26■□□□□ 0.99
CHRNA3-206ENST00000559658 CCDC125Q86Z20 511 aa21.26■□□□□ 0.99
CHRNA3-206ENST00000559658 ARAP2Q8WZ64 1704 aa21.25■□□□□ 0.99
CHRNA3-206ENST00000559658 A0A1B0GUL7 405 aa21.25■□□□□ 0.99
CHRNA3-206ENST00000559658 ADORA1P30542 326 aa21.25■□□□□ 0.99
CHRNA3-206ENST00000559658 CEP126Q9P2H0 1117 aa21.25■□□□□ 0.99
CHRNA3-206ENST00000559658 FBXO3Q9UK99 471 aa21.25■□□□□ 0.99
CHRNA3-206ENST00000559658 TAF5LO75529 589 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 ST5P78524 1137 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 NEUROD6Q96NK8 337 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 MPHOSPH8Q99549 860 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 ECHDC1Q9NTX5 307 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 AOX1Q06278 1338 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 WTIPA6NIX2 430 aaPredicted RBP21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 NDUFB9Q9Y6M9 179 aa21.24■□□□□ 0.99
CHRNA3-206ENST00000559658 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
CHRNA3-206ENST00000559658 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
CHRNA3-206ENST00000559658 ANKRD18AQ8IVF6 992 aa21.22■□□□□ 0.99
CHRNA3-206ENST00000559658 CDC5LQ99459 802 aaKnown RBP21.22■□□□□ 0.99
CHRNA3-206ENST00000559658 CRY2Q49AN0 593 aa21.22■□□□□ 0.99
CHRNA3-206ENST00000559658 TBC1D9Q6ZT07 1266 aa21.22■□□□□ 0.99
CHRNA3-206ENST00000559658 GPR108Q9NPR9 543 aa21.22■□□□□ 0.99
CHRNA3-206ENST00000559658 CHRNDQ07001 517 aa21.21■□□□□ 0.99
CHRNA3-206ENST00000559658 PARP3Q9Y6F1 533 aa21.21■□□□□ 0.99
CHRNA3-206ENST00000559658 PDE8BO95263 885 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 EDC3Q96F86 508 aaKnown RBP21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 BOLA2Q9H3K6 86 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 CACNA1SQ13698 1873 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 MROH5Q6ZUA9 1318 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 TRIM6-TRIM34B2RNG4 842 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 DDX46Q7L014 1031 aaKnown RBP21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 RILPL2Q969X0 211 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 XAGE2Q96GT9 111 aa21.2■□□□□ 0.98
CHRNA3-206ENST00000559658 RPS8P62241 208 aaKnown RBP21.19■□□□□ 0.98
CHRNA3-206ENST00000559658 RBM19Q9Y4C8 960 aaKnown RBP21.19■□□□□ 0.98
CHRNA3-206ENST00000559658 GLRX3O76003 335 aaKnown RBP21.18■□□□□ 0.98
CHRNA3-206ENST00000559658 FGFR2P21802 821 aa21.18■□□□□ 0.98
CHRNA3-206ENST00000559658 GPATCH3Q96I76 525 aa21.18■□□□□ 0.98
CHRNA3-206ENST00000559658 BSDC1Q9NW68 430 aaPredicted RBP21.18■□□□□ 0.98
CHRNA3-206ENST00000559658 MINPP1Q9UNW1 487 aa21.18■□□□□ 0.98
CHRNA3-206ENST00000559658 KLRG2A4D1S0 409 aaPredicted RBP21.17■□□□□ 0.98
CHRNA3-206ENST00000559658 CDC45O75419 566 aa21.17■□□□□ 0.98
CHRNA3-206ENST00000559658 GRAPQ13588 217 aa21.17■□□□□ 0.98
CHRNA3-206ENST00000559658 GRAPLQ8TC17 118 aaPredicted RBP21.17■□□□□ 0.98
CHRNA3-206ENST00000559658 RPGRQ92834 1020 aaKnown RBP21.17■□□□□ 0.98
CHRNA3-206ENST00000559658 AKAP2Q9Y2D5 859 aa21.17■□□□□ 0.98
CHRNA3-206ENST00000559658 ERC2O15083 957 aa21.16■□□□□ 0.98
CHRNA3-206ENST00000559658 SCARF1Q14162 830 aa21.16■□□□□ 0.98
CHRNA3-206ENST00000559658 PUM3Q15397 648 aaKnown RBP21.16■□□□□ 0.98
CHRNA3-206ENST00000559658 ATP5JP18859 108 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 R3HDM1Q15032 1099 aaKnown RBP21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 BRIP1Q9BX63 1249 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 AKAP11Q9UKA4 1901 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 ZBTB7AO95365 584 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 KLRK1P26718 216 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 PI16Q6UXB8 463 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 IL25Q9H293 177 aa21.15■□□□□ 0.98
CHRNA3-206ENST00000559658 ILDR2Q71H61 639 aa21.14■□□□□ 0.97
CHRNA3-206ENST00000559658 DNAJC2Q99543 621 aaKnown RBP21.14■□□□□ 0.97
CHRNA3-206ENST00000559658 LRRC37AA6NMS7 1700 aa21.14■□□□□ 0.97
CHRNA3-206ENST00000559658 CHGBP05060 677 aa21.13■□□□□ 0.97
CHRNA3-206ENST00000559658 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
CHRNA3-206ENST00000559658 PSDA5PKW4 1024 aaPredicted RBP21.13■□□□□ 0.97
CHRNA3-206ENST00000559658 SRGNP10124 158 aa21.13■□□□□ 0.97
CHRNA3-206ENST00000559658 PHKA1P46020 1223 aa21.13■□□□□ 0.97
CHRNA3-206ENST00000559658 LPIN2Q92539 896 aa21.13■□□□□ 0.97
CHRNA3-206ENST00000559658 HOXA10P31260 410 aaPredicted RBP21.12■□□□□ 0.97
CHRNA3-206ENST00000559658 LTBP1Q14766 1721 aa21.12■□□□□ 0.97
CHRNA3-206ENST00000559658 MYO5AQ9Y4I1 1855 aaKnown RBP21.12■□□□□ 0.97
CHRNA3-206ENST00000559658 OLFM4Q6UX06 510 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 RBM17Q96I25 401 aaKnown RBP21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 SNRKQ9NRH2 765 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 CHMLP26374 656 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 CHRNA5P30532 468 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 GORABQ5T7V8 394 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 CNTROBQ8N137 903 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 HAUS7Q99871 368 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 C10orf71Q711Q0 1435 aa21.11■□□□□ 0.97
CHRNA3-206ENST00000559658 SLC5A1P13866 664 aa21.1■□□□□ 0.97
CHRNA3-206ENST00000559658 MCAMP43121 646 aa21.1■□□□□ 0.97
CHRNA3-206ENST00000559658 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
CHRNA3-206ENST00000559658 CCDC102BQ68D86 513 aa21.1■□□□□ 0.97
CHRNA3-206ENST00000559658 ANTXR1Q9H6X2 564 aa21.1■□□□□ 0.97
CHRNA3-206ENST00000559658 ATF5Q9Y2D1 282 aaPredicted RBP21.1■□□□□ 0.97
CHRNA3-206ENST00000559658 IFIT1P09914 478 aaKnown RBP21.09■□□□□ 0.97
CHRNA3-206ENST00000559658 GPR101Q96P66 508 aaPredicted RBP21.09■□□□□ 0.97
CHRNA3-206ENST00000559658 BCAMP50895 628 aa21.09■□□□□ 0.97
CHRNA3-206ENST00000559658 COL1A1P02452 1464 aaPredicted RBP21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 GOLIM4O00461 696 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 PDE6BP35913 854 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 GYG1P46976 350 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 SLFNL1Q499Z3 407 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 CCDC158Q5M9N0 1113 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 C2CD5Q86YS7 1000 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 EVI5LQ96CN4 794 aa21.08■□□□□ 0.97
CHRNA3-206ENST00000559658 CRAMP1Q96RY5 1269 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms