RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 HSP90B1P14625 803 aaKnown RBP19.6■□□□□ 0.73
SPG11-215ENST00000559193 HMGN5P82970 282 aaKnown RBP19.6■□□□□ 0.73
SPG11-215ENST00000559193 DCAF5Q96JK2 942 aa19.6■□□□□ 0.73
SPG11-215ENST00000559193 LRRC2Q9BYS8 371 aa19.6■□□□□ 0.73
SPG11-215ENST00000559193 COL18A1P39060 1754 aa19.6■□□□□ 0.73
SPG11-215ENST00000559193 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.73
SPG11-215ENST00000559193 SCRN1Q12765 414 aa19.59■□□□□ 0.73
SPG11-215ENST00000559193 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
SPG11-215ENST00000559193 KBTBD3Q8NAB2 608 aa19.59■□□□□ 0.73
SPG11-215ENST00000559193 DDX11Q96FC9 970 aa19.59■□□□□ 0.73
SPG11-215ENST00000559193 SH3TC1Q8TE82 1336 aa19.59■□□□□ 0.73
SPG11-215ENST00000559193 GOLGA6L6A8MZA4 724 aa19.59■□□□□ 0.73
SPG11-215ENST00000559193 MTERF4Q7Z6M4 381 aaKnown RBP19.59■□□□□ 0.73
SPG11-215ENST00000559193 BICD2Q8TD16 824 aa19.59■□□□□ 0.73
SPG11-215ENST00000559193 LMBR1LQ6UX01 489 aa19.58■□□□□ 0.73
SPG11-215ENST00000559193 PLBD2Q8NHP8 589 aa19.58■□□□□ 0.73
SPG11-215ENST00000559193 SMARCC2Q8TAQ2 1214 aa19.58■□□□□ 0.72
SPG11-215ENST00000559193 PALLDQ8WX93 1383 aa19.58■□□□□ 0.72
SPG11-215ENST00000559193 TSC1Q92574 1164 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
SPG11-215ENST00000559193 PKD1L3Q7Z443 1732 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 H3BQV1 296 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 CSB-PGBD3P0DP91 1061 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 PTGS1P23219 599 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 FOXO4P98177 505 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
SPG11-215ENST00000559193 PFKFB2O60825 505 aa19.56■□□□□ 0.72
SPG11-215ENST00000559193 DDX17Q92841 729 aaKnown RBP19.56■□□□□ 0.72
SPG11-215ENST00000559193 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
SPG11-215ENST00000559193 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
SPG11-215ENST00000559193 NSUN7Q8NE18 718 aaKnown RBP19.56■□□□□ 0.72
SPG11-215ENST00000559193 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
SPG11-215ENST00000559193 ADAMTSL3P82987 1691 aa19.56■□□□□ 0.72
SPG11-215ENST00000559193 C19orf44Q9H6X5 657 aa19.55■□□□□ 0.72
SPG11-215ENST00000559193 LAMA4Q16363 1823 aa19.55■□□□□ 0.72
SPG11-215ENST00000559193 GOLIM4O00461 696 aa19.55■□□□□ 0.72
SPG11-215ENST00000559193 ZNF710Q8N1W2 664 aa19.55■□□□□ 0.72
SPG11-215ENST00000559193 LLPHQ9BRT6 129 aaKnown RBP19.55■□□□□ 0.72
SPG11-215ENST00000559193 PAG1Q9NWQ8 432 aa19.55■□□□□ 0.72
SPG11-215ENST00000559193 PLEKHG2Q9H7P9 1386 aa19.55■□□□□ 0.72
SPG11-215ENST00000559193 H7C1W4 665 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 CTDNEP1O95476 244 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 ADD1P35611 737 aaKnown RBP19.54■□□□□ 0.72
SPG11-215ENST00000559193 CABP4P57796 275 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 DHX32Q7L7V1 743 aaKnown RBP19.54■□□□□ 0.72
SPG11-215ENST00000559193 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 DNAJC25Q9H1X3 360 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 FGD1P98174 961 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 NBPF14Q5TI25 921 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
SPG11-215ENST00000559193 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 CABLES1Q8TDN4 633 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 ZMYND15Q9H091 742 aa19.54■□□□□ 0.72
SPG11-215ENST00000559193 HMGB1P09429 215 aaKnown RBP19.53■□□□□ 0.72
SPG11-215ENST00000559193 ZNF75DP51815 510 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 APOBRQ0VD83 1088 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 NEUROD6Q96NK8 337 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 DSCC1Q9BVC3 393 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 HELLSQ9NRZ9 838 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 CFAP45Q9UL16 551 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 A0A0G2JLW4 131 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 ZNF165P49910 485 aa19.53■□□□□ 0.72
SPG11-215ENST00000559193 NAA16Q6N069 864 aaPredicted RBP19.53■□□□□ 0.72
SPG11-215ENST00000559193 TJP1Q07157 1748 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 PTPDC1A2A3K4 754 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 EXOSC10Q01780 885 aaKnown RBP19.52■□□□□ 0.72
SPG11-215ENST00000559193 ZMYM1Q5SVZ6 1142 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 CCDC186Q7Z3E2 898 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 AGXT2Q9BYV1 514 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.72
SPG11-215ENST00000559193 FOSBP53539 338 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 TIMM10P62072 90 aa19.52■□□□□ 0.72
SPG11-215ENST00000559193 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.72
SPG11-215ENST00000559193 ARID3AQ99856 593 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 TRIM5Q9C035 493 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 GPR108Q9NPR9 543 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 NRBP1Q9UHY1 535 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 KIF3AQ9Y496 699 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 MYH15Q9Y2K3 1946 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 PARP4Q9UKK3 1724 aaKnown RBP19.51■□□□□ 0.71
SPG11-215ENST00000559193 TTLL7Q6ZT98 887 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 NUP188Q5SRE5 1749 aa19.51■□□□□ 0.71
SPG11-215ENST00000559193 LRMPQ12912 555 aa19.5■□□□□ 0.71
SPG11-215ENST00000559193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.5■□□□□ 0.71
SPG11-215ENST00000559193 MAST3O60307 1309 aa19.5■□□□□ 0.71
SPG11-215ENST00000559193 SALL1Q9NSC2 1324 aa19.5■□□□□ 0.71
SPG11-215ENST00000559193 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
SPG11-215ENST00000559193 E7EWF7 191 aa19.5■□□□□ 0.71
SPG11-215ENST00000559193 HSPD1P10809 573 aaKnown RBP19.5■□□□□ 0.71
SPG11-215ENST00000559193 CWC25Q9NXE8 425 aaPredicted RBP19.5■□□□□ 0.71
SPG11-215ENST00000559193 RCOR1Q9UKL0 485 aa19.5■□□□□ 0.71
SPG11-215ENST00000559193 TMEM94Q12767 1356 aa19.49■□□□□ 0.71
SPG11-215ENST00000559193 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
SPG11-215ENST00000559193 IL15P40933 162 aaPredicted RBP19.49■□□□□ 0.71
SPG11-215ENST00000559193 CCT2P78371 535 aaKnown RBP19.49■□□□□ 0.71
SPG11-215ENST00000559193 LRRC24Q50LG9 513 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms