RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HDGFL1Q5TGJ6 251 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 KIF6Q6ZMV9 814 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 NBPF5PQ86XG9 351 aaPredicted RBP7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 C2CD5Q86YS7 1000 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 DDX21Q9NR30 783 aaKnown RBP eCLIP7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 CHPF2Q9P2E5 772 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 UBN2Q6ZU65 1347 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 FAM9BQ8IZU0 186 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 XAGE3Q8WTP9 111 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 TSR2Q969E8 191 aaKnown RBP7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 ABCC12Q96J65 1359 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 ARFGEF2Q9Y6D5 1785 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 CACNA1SQ13698 1873 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 IBTKQ9P2D0 1353 aaPredicted RBP7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 FAM177BA6PVY3 158 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 PPP1R3GB7ZBB8 358 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 H0YIN7 160 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 NPHP1O15259 732 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 HOXB1P14653 301 aaPredicted RBP7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 GPTP24298 496 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 PDE6BP35913 854 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 ST5P78524 1137 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 NUDT18Q6ZVK8 323 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 COPS6Q7L5N1 327 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 ZNF34Q8IZ26 560 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 C8orf58Q8NAV2 365 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 SBF1O95248 1867 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 SLX4Q8IY92 1834 aa7.8□□□□□ -1.16
CTDSPL2-204ENST00000558966 RIC1Q4ADV7 1423 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 IL16Q14005 1332 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 KLRG2A4D1S0 409 aaPredicted RBP7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 ELL2O00472 640 aaPredicted RBP7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 SRGNP10124 158 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 AIMP1Q12904 312 aaKnown RBP7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 TSPYL6Q8N831 410 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 DBF4Q9UBU7 674 aaPredicted RBP7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 SNPHO15079 494 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 NTSR2O95665 410 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 FLIIQ13045 1269 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 MYSM1Q5VVJ2 828 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 SUSD4Q5VX71 490 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 TPTE2Q6XPS3 522 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 NUTM1Q86Y26 1132 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 PDZRN3Q9UPQ7 1066 aa7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 SALL2Q9Y467 1007 aaPredicted RBP7.79□□□□□ -1.16
CTDSPL2-204ENST00000558966 SMAPO00193 183 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 PROX2Q3B8N5 592 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 ERFEQ4G0M1 354 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 ZNF622Q969S3 477 aaKnown RBP eCLIP7.78□□□□□ -1.165e-7■■□□□ 14.3
CTDSPL2-204ENST00000558966 TBC1D2Q9BYX2 928 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 NYXQ9GZU5 481 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 PNMA3Q9UL41 463 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 FER1L6Q2WGJ9 1857 aa7.78□□□□□ -1.16
CTDSPL2-204ENST00000558966 FANCIQ9NVI1 1328 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 RASSF7Q02833 373 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 PARP10Q53GL7 1025 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 STYK1Q6J9G0 422 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 WDR63Q8IWG1 891 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 MASTLQ96GX5 879 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 KCNK17Q96T54 332 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 PHAXQ9H814 394 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 HYPKQ9NX55 129 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 LAMB2P55268 1798 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 CCDC88AQ3V6T2 1871 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 NFKBIEO00221 500 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 NPR1P16066 1061 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 PRELPP51888 382 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 TCIRG1Q13488 830 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 CRY2Q49AN0 593 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 PRPF40BQ6NWY9 871 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 PLBD2Q8NHP8 589 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 TATDN2Q93075 761 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 CNKSR1Q969H4 720 aa7.77□□□□□ -1.17
CTDSPL2-204ENST00000558966 ZNF521Q96K83 1311 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 C21orf2O43822 256 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 HSP90AB3PQ58FF7 597 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 C9orf131Q5VYM1 1079 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 ANKRD13DQ6ZTN6 518 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 PPP1R42Q7Z4L9 355 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 NLRP10Q86W26 655 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 C7orf43Q8WVR3 580 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 TIAM2Q8IVF5 1701 aa7.76□□□□□ -1.17
CTDSPL2-204ENST00000558966 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 CLK2P49760 499 aaKnown RBP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 TWISTNBQ3B726 338 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 CCDC30Q5VVM6 783 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 SYNE4Q8N205 404 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 ISCA1Q9BUE6 129 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 UTP14AQ9BVJ6 771 aaKnown RBP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 RNF181Q9P0P0 153 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 DDX60Q8IY21 1712 aaKnown RBP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 DICER1Q9UPY3 1922 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms