RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 ZNF827Q17R98 1081 aa9.38□□□□□ -0.91
TRAF3-206ENST00000558880 PROSER3Q2NL68 480 aa9.38□□□□□ -0.91
TRAF3-206ENST00000558880 COL13A1Q5TAT6 717 aaPredicted RBP9.38□□□□□ -0.91
TRAF3-206ENST00000558880 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
TRAF3-206ENST00000558880 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
TRAF3-206ENST00000558880 CICQ96RK0 1608 aaPredicted RBP9.38□□□□□ -0.91
TRAF3-206ENST00000558880 TJP1Q07157 1748 aa9.37□□□□□ -0.91
TRAF3-206ENST00000558880 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
TRAF3-206ENST00000558880 HOXB7P09629 217 aa9.37□□□□□ -0.91
TRAF3-206ENST00000558880 SNRPA1P09661 255 aaKnown RBP9.37□□□□□ -0.91
TRAF3-206ENST00000558880 TWISTNBQ3B726 338 aaPredicted RBP9.37□□□□□ -0.91
TRAF3-206ENST00000558880 PPP1R18Q6NYC8 613 aa9.37□□□□□ -0.91
TRAF3-206ENST00000558880 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
TRAF3-206ENST00000558880 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
TRAF3-206ENST00000558880 LY75O60449 1722 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
TRAF3-206ENST00000558880 HOXA2O43364 376 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 A1BGP04217 495 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 PIP4K2AP48426 406 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-206ENST00000558880 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
TRAF3-206ENST00000558880 GRIPAP1Q4V328 841 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 G2E3Q7L622 706 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 C5P01031 1676 aa9.36□□□□□ -0.91
TRAF3-206ENST00000558880 TCERG1O14776 1098 aaKnown RBP9.35□□□□□ -0.91
TRAF3-206ENST00000558880 S1PR4O95977 384 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 ANXA1P04083 346 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 TTC5Q8N0Z6 440 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 CCNL1Q9UK58 526 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-206ENST00000558880 ZBTB1Q9Y2K1 713 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 ZNF831Q5JPB2 1677 aa9.35□□□□□ -0.91
TRAF3-206ENST00000558880 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-206ENST00000558880 BCAR3O75815 825 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 ADH1BP00325 375 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 CRKLP46109 303 aaKnown RBP9.34□□□□□ -0.91
TRAF3-206ENST00000558880 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-206ENST00000558880 USP46P62068 366 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 DNAJC5GQ8N7S2 189 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 SPSB2Q99619 263 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 TNNQ9UQP3 1299 aa9.34□□□□□ -0.91
TRAF3-206ENST00000558880 RNF123Q5XPI4 1314 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 CNTNAP4Q9C0A0 1308 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 PRKCSHP14314 528 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 NDUFV2P19404 249 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 EIF2S2P20042 333 aaKnown RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 PRELPP51888 382 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 EIF5P55010 431 aaKnown RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.33□□□□□ -0.92
TRAF3-206ENST00000558880 TFCP2L1Q9NZI6 479 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 CHPF2Q9P2E5 772 aa9.33□□□□□ -0.92
TRAF3-206ENST00000558880 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
TRAF3-206ENST00000558880 MYH14Q7Z406 1995 aaKnown RBP9.32□□□□□ -0.92
TRAF3-206ENST00000558880 COL5A3P25940 1745 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-206ENST00000558880 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
TRAF3-206ENST00000558880 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-206ENST00000558880 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-206ENST00000558880 MSL1Q68DK7 614 aa9.32□□□□□ -0.92
TRAF3-206ENST00000558880 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
TRAF3-206ENST00000558880 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
TRAF3-206ENST00000558880 TBC1D2Q9BYX2 928 aa9.32□□□□□ -0.92
TRAF3-206ENST00000558880 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRAF3-206ENST00000558880 ALDH1L2Q3SY69 923 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 BRICD5Q6PL45 260 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 TTLL7Q6ZT98 887 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
TRAF3-206ENST00000558880 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
TRAF3-206ENST00000558880 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 PRDM9Q9NQV7 894 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 CCDC87Q9NVE4 849 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 COL24A1Q17RW2 1714 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
TRAF3-206ENST00000558880 KAT6BQ8WYB5 2073 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 ADCY9O60503 1353 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 RPS6KA4O75676 772 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 STARD3NLO95772 234 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 GGCXP38435 758 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 IL6STP40189 918 aaPredicted RBP9.3□□□□□ -0.92
TRAF3-206ENST00000558880 ZNF428Q96B54 188 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 RCAN3Q9UKA8 241 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 C4BP0C0L5 1744 aa9.3□□□□□ -0.92
TRAF3-206ENST00000558880 TUBGCP6Q96RT7 1819 aa9.29□□□□□ -0.92
TRAF3-206ENST00000558880 FDX1P10109 184 aa9.29□□□□□ -0.92
TRAF3-206ENST00000558880 CANXP27824 592 aaKnown RBP9.29□□□□□ -0.92
TRAF3-206ENST00000558880 HTRA3P83110 453 aa9.29□□□□□ -0.92
TRAF3-206ENST00000558880 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
TRAF3-206ENST00000558880 COPS6Q7L5N1 327 aa9.29□□□□□ -0.92
TRAF3-206ENST00000558880 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
TRAF3-206ENST00000558880 XAGE3Q8WTP9 111 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms