RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
PSMA4-207ENST00000558635 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
PSMA4-207ENST00000558635 SUCLG2Q96I99 432 aa13.07□□□□□ -0.32
PSMA4-207ENST00000558635 MEIS3Q99687 375 aa13.07□□□□□ -0.32
PSMA4-207ENST00000558635 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
PSMA4-207ENST00000558635 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
PSMA4-207ENST00000558635 FOXO4P98177 505 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
PSMA4-207ENST00000558635 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 TTLL11Q8NHH1 800 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 CNKSR1Q969H4 720 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 KAZALD1Q96I82 304 aa13.06□□□□□ -0.32
PSMA4-207ENST00000558635 CCDC85AQ96PX6 553 aaPredicted RBP13.06□□□□□ -0.32
PSMA4-207ENST00000558635 N4BP2Q86UW6 1770 aaPredicted RBP13.06□□□□□ -0.32
PSMA4-207ENST00000558635 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
PSMA4-207ENST00000558635 CSF1RP07333 972 aa13.05□□□□□ -0.32
PSMA4-207ENST00000558635 GNAI3P08754 354 aa13.05□□□□□ -0.32
PSMA4-207ENST00000558635 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
PSMA4-207ENST00000558635 DDX46Q7L014 1031 aaKnown RBP13.05□□□□□ -0.32
PSMA4-207ENST00000558635 CRAMP1Q96RY5 1269 aa13.05□□□□□ -0.32
PSMA4-207ENST00000558635 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
PSMA4-207ENST00000558635 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
PSMA4-207ENST00000558635 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
PSMA4-207ENST00000558635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
PSMA4-207ENST00000558635 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 GREM2Q9H772 168 aa13.04□□□□□ -0.32
PSMA4-207ENST00000558635 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
PSMA4-207ENST00000558635 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
PSMA4-207ENST00000558635 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
PSMA4-207ENST00000558635 GRAPQ13588 217 aa13.03□□□□□ -0.32
PSMA4-207ENST00000558635 GPR162Q16538 588 aa13.03□□□□□ -0.32
PSMA4-207ENST00000558635 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
PSMA4-207ENST00000558635 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
PSMA4-207ENST00000558635 GRAPLQ8TC17 118 aaPredicted RBP13.03□□□□□ -0.32
PSMA4-207ENST00000558635 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
PSMA4-207ENST00000558635 CHMP3Q9Y3E7 222 aa13.03□□□□□ -0.32
PSMA4-207ENST00000558635 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
PSMA4-207ENST00000558635 LAMB2P55268 1798 aa13.02□□□□□ -0.32
PSMA4-207ENST00000558635 BBOX1O75936 387 aa13.02□□□□□ -0.33
PSMA4-207ENST00000558635 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
PSMA4-207ENST00000558635 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.33
PSMA4-207ENST00000558635 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
PSMA4-207ENST00000558635 CELF1Q92879 486 aaKnown RBP13.02□□□□□ -0.33
PSMA4-207ENST00000558635 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
PSMA4-207ENST00000558635 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
PSMA4-207ENST00000558635 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
PSMA4-207ENST00000558635 C21orf2O43822 256 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 GNAI2P04899 355 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 ITGA6P23229 1130 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
PSMA4-207ENST00000558635 SLC51AQ86UW1 340 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
PSMA4-207ENST00000558635 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
PSMA4-207ENST00000558635 ANKRD18BA2A2Z9 1011 aa13□□□□□ -0.33
PSMA4-207ENST00000558635 IFIT5Q13325 482 aaKnown RBP13□□□□□ -0.33
PSMA4-207ENST00000558635 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
PSMA4-207ENST00000558635 OLFM4Q6UX06 510 aa13□□□□□ -0.33
PSMA4-207ENST00000558635 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
PSMA4-207ENST00000558635 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
PSMA4-207ENST00000558635 C1orf115Q9H7X2 142 aa13□□□□□ -0.33
PSMA4-207ENST00000558635 EIF2AK3Q9NZJ5 1116 aaKnown RBP13□□□□□ -0.33
PSMA4-207ENST00000558635 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
PSMA4-207ENST00000558635 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
PSMA4-207ENST00000558635 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
PSMA4-207ENST00000558635 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
PSMA4-207ENST00000558635 COL4A1P02462 1669 aa12.99□□□□□ -0.33
PSMA4-207ENST00000558635 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
PSMA4-207ENST00000558635 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
PSMA4-207ENST00000558635 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
PSMA4-207ENST00000558635 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
PSMA4-207ENST00000558635 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
PSMA4-207ENST00000558635 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
PSMA4-207ENST00000558635 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
PSMA4-207ENST00000558635 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
PSMA4-207ENST00000558635 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
PSMA4-207ENST00000558635 CHMP4BQ9H444 224 aaKnown RBP12.98□□□□□ -0.33
PSMA4-207ENST00000558635 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
PSMA4-207ENST00000558635 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
PSMA4-207ENST00000558635 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
PSMA4-207ENST00000558635 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
PSMA4-207ENST00000558635 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
PSMA4-207ENST00000558635 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
PSMA4-207ENST00000558635 MYH3P11055 1940 aa12.97□□□□□ -0.33
PSMA4-207ENST00000558635 TAF1P21675 1872 aa12.96□□□□□ -0.33
PSMA4-207ENST00000558635 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
PSMA4-207ENST00000558635 MTX1Q13505 466 aa12.96□□□□□ -0.33
PSMA4-207ENST00000558635 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.33
PSMA4-207ENST00000558635 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
PSMA4-207ENST00000558635 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms