RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 AAMPQ13685 434 aa6.45□□□□□ -1.38
LRRC28-205ENST00000558248 TTC39BQ5VTQ0 682 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-205ENST00000558248 FRRS1LQ9P0K9 344 aa6.45□□□□□ -1.38
LRRC28-205ENST00000558248 MMP20O60882 483 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 ABL1P00519 1130 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 GHRHP01286 108 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 RAC1P63000 192 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 DNM1Q05193 864 aaKnown RBP6.44□□□□□ -1.38
LRRC28-205ENST00000558248 TRIM28Q13263 835 aaKnown RBP6.44□□□□□ -1.38
LRRC28-205ENST00000558248 TRIP4Q15650 581 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-205ENST00000558248 PLA2G4EQ3MJ16 856 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 FAM26DQ5JW98 314 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 TRAPPC3LQ5T215 181 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 C20orf204Q6ZNR8 217 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 NAGPAQ9UK23 515 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 FANCD2Q9BXW9 1451 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 PEG3Q9GZU2 1588 aa6.44□□□□□ -1.38
LRRC28-205ENST00000558248 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 CARNS1A5YM72 827 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 MSTNO14793 375 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 ZBTB39O15060 712 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 APBA3O96018 575 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 NID1P14543 1247 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 MPSTP25325 297 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 SCNN1AP37088 669 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 EIF1AXP47813 144 aaKnown RBP6.43□□□□□ -1.38
LRRC28-205ENST00000558248 PDE12Q6L8Q7 609 aaKnown RBP6.43□□□□□ -1.38
LRRC28-205ENST00000558248 C8orf86Q6ZUL3 223 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 ZNF438Q7Z4V0 828 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 RETREG2Q8NC44 543 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 NUDT16Q96DE0 195 aaKnown RBP6.43□□□□□ -1.38
LRRC28-205ENST00000558248 SPACA7Q96KW9 195 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 NSUN5Q96P11 429 aaKnown RBP6.43□□□□□ -1.38
LRRC28-205ENST00000558248 NACC1Q96RE7 527 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
LRRC28-205ENST00000558248 ZNF608Q9ULD9 1512 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 LOC102724428A0A0B4J2F2 783 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 HOXD8P13378 290 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 MZF1P28698 734 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 AFF1P51825 1210 aaKnown RBP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 SIK1P57059 783 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 FKBP4Q02790 459 aaKnown RBP eCLIP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 HYAL2Q12891 473 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 PERM1Q5SV97 790 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 HFE2Q6ZVN8 426 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 ATCAYQ86WG3 371 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 EDEM1Q92611 657 aa6.42□□□□□ -1.38
LRRC28-205ENST00000558248 SMG9Q9H0W8 520 aaKnown RBP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 ABI2Q9NYB9 513 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-205ENST00000558248 URB2Q14146 1524 aaKnown RBP6.41□□□□□ -1.38
LRRC28-205ENST00000558248 LOC105371045A0A1W2PR82 267 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 ZBTB42B2RXF5 422 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 USP5P45974 858 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 MTMR3Q13615 1198 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 PHLDB3Q6NSJ2 640 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 WFDC8Q8IUA0 241 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 OR13H1Q8NG92 308 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 TTC9Q92623 222 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 ELP3Q9H9T3 547 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 EGFL7Q9UHF1 273 aa6.41□□□□□ -1.38
LRRC28-205ENST00000558248 PDGFAP04085 211 aa6.4□□□□□ -1.38
LRRC28-205ENST00000558248 CDK11BP21127 795 aaKnown RBP6.4□□□□□ -1.38
LRRC28-205ENST00000558248 EHHADHQ08426 723 aa6.4□□□□□ -1.38
LRRC28-205ENST00000558248 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-205ENST00000558248 PLD4Q96BZ4 506 aa6.4□□□□□ -1.38
LRRC28-205ENST00000558248 SPOCK3Q9BQ16 436 aa6.4□□□□□ -1.38
LRRC28-205ENST00000558248 TRAIPQ9BWF2 469 aa6.4□□□□□ -1.38
LRRC28-205ENST00000558248 CDK11AQ9UQ88 783 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-205ENST00000558248 FAM177BA6PVY3 158 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 EIF5BO60841 1220 aaKnown RBP6.39□□□□□ -1.39
LRRC28-205ENST00000558248 HSP90B1P14625 803 aaKnown RBP6.39□□□□□ -1.39
LRRC28-205ENST00000558248 ELNP15502 786 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 NPR3P17342 541 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 COL9A3Q14050 684 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-205ENST00000558248 MSL1Q68DK7 614 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 NCAPG2Q86XI2 1143 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 GLYCTKQ8IVS8 523 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 CACTIN-AS1Q8N1I8 211 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 DTWD1Q8N5C7 304 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 DCAF11Q8TEB1 546 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 MROH2BQ7Z745 1585 aa6.39□□□□□ -1.39
LRRC28-205ENST00000558248 A0A0A0MRY4 1105 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 H3BRB1 525 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 J3QW42 95 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 SMNDC1O75940 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
LRRC28-205ENST00000558248 TMCO4Q5TGY1 634 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 DMRTC2Q8IXT2 367 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-205ENST00000558248 CCER1Q8TC90 406 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-205ENST00000558248 PMEPA1Q969W9 287 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 TUT1Q9H6E5 874 aaKnown RBP6.38□□□□□ -1.39
LRRC28-205ENST00000558248 ANO2Q9NQ90 1003 aa6.38□□□□□ -1.39
LRRC28-205ENST00000558248 RSF1Q96T23 1441 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-205ENST00000558248 ICMTO60725 284 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 IGSF3O75054 1194 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 CES1P23141 567 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms