RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZNF157P51786 506 aaPredicted RBP6.87□□□□□ -1.31
SPG11-208ENST00000558155 DCTN1Q14203 1278 aa6.87□□□□□ -1.31
SPG11-208ENST00000558155 PKN2Q16513 984 aaKnown RBP6.87□□□□□ -1.31
SPG11-208ENST00000558155 GIGYF2Q6Y7W6 1299 aaKnown RBP6.87□□□□□ -1.31
SPG11-208ENST00000558155 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
SPG11-208ENST00000558155 DDX46Q7L014 1031 aaKnown RBP6.87□□□□□ -1.31
SPG11-208ENST00000558155 KRT26Q7Z3Y9 468 aa6.87□□□□□ -1.31
SPG11-208ENST00000558155 CTU1Q7Z7A3 348 aaKnown RBP6.87□□□□□ -1.31
SPG11-208ENST00000558155 DCPSQ96C86 337 aaKnown RBP6.87□□□□□ -1.31
SPG11-208ENST00000558155 ZBTB3Q9H5J0 574 aa6.87□□□□□ -1.31
SPG11-208ENST00000558155 RIC1Q4ADV7 1423 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 UBN2Q6ZU65 1347 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 FAM155AB1AL88 458 aaPredicted RBP6.86□□□□□ -1.31
SPG11-208ENST00000558155 NTSR2O95665 410 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 RBM26Q5T8P6 1007 aaKnown RBP6.86□□□□□ -1.31
SPG11-208ENST00000558155 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 MICALL2Q8IY33 904 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 SLAIN1Q8ND83 568 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 GCC1Q96CN9 775 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
SPG11-208ENST00000558155 ABCC4O15439 1325 aa6.85□□□□□ -1.31
SPG11-208ENST00000558155 RPS12P25398 132 aaKnown RBP6.85□□□□□ -1.31
SPG11-208ENST00000558155 EIF4A1P60842 406 aaKnown RBP6.85□□□□□ -1.31
SPG11-208ENST00000558155 WASHC4Q2M389 1173 aa6.85□□□□□ -1.31
SPG11-208ENST00000558155 TBC1D10BQ4KMP7 808 aaPredicted RBP6.85□□□□□ -1.31
SPG11-208ENST00000558155 HSP90AB3PQ58FF7 597 aa6.85□□□□□ -1.31
SPG11-208ENST00000558155 C3orf67Q6ZVT6 689 aa6.85□□□□□ -1.31
SPG11-208ENST00000558155 SAMD7Q7Z3H4 446 aa6.85□□□□□ -1.31
SPG11-208ENST00000558155 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
SPG11-208ENST00000558155 COL3A1P02461 1466 aaPredicted RBP6.85□□□□□ -1.31
SPG11-208ENST00000558155 ERBB4Q15303 1308 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 SHTN1A0MZ66 631 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 YDJCA8MPS7 323 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 PSMD14O00487 310 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 SLC10A3P09131 477 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 IRX5P78411 483 aaPredicted RBP6.84□□□□□ -1.31
SPG11-208ENST00000558155 GRAPQ13588 217 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 DLK2Q6UY11 383 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 GRAPLQ8TC17 118 aaPredicted RBP6.84□□□□□ -1.31
SPG11-208ENST00000558155 EYA3Q99504 573 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 NSFL1CQ9UNZ2 370 aaKnown RBP6.84□□□□□ -1.31
SPG11-208ENST00000558155 HPS5Q9UPZ3 1129 aa6.84□□□□□ -1.31
SPG11-208ENST00000558155 G3V3G9 751 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 C6orf229H3BNL8 230 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 RIMBP2O15034 1052 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
SPG11-208ENST00000558155 EIF2S2P20042 333 aaKnown RBP6.83□□□□□ -1.32
SPG11-208ENST00000558155 FKBP1BP68106 108 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 DCAF8Q5TAQ9 597 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 SLC51AQ86UW1 340 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 TMEM106CQ9BVX2 250 aa6.83□□□□□ -1.32
SPG11-208ENST00000558155 PNNQ9H307 717 aaKnown RBP6.83□□□□□ -1.32
SPG11-208ENST00000558155 TRMT112Q9UI30 125 aaKnown RBP6.83□□□□□ -1.32
SPG11-208ENST00000558155 SH3TC1Q8TE82 1336 aa6.82□□□□□ -1.32
SPG11-208ENST00000558155 ADM5C9JUS6 153 aa6.82□□□□□ -1.32
SPG11-208ENST00000558155 TCIRG1Q13488 830 aa6.82□□□□□ -1.32
SPG11-208ENST00000558155 KIF4BQ2VIQ3 1234 aa6.82□□□□□ -1.32
SPG11-208ENST00000558155 NLRP10Q86W26 655 aa6.82□□□□□ -1.32
SPG11-208ENST00000558155 THUMPD2Q9BTF0 503 aaKnown RBP6.82□□□□□ -1.32
SPG11-208ENST00000558155 ZC3H12CQ9C0D7 883 aaKnown RBP6.82□□□□□ -1.32
SPG11-208ENST00000558155 DBNDD1Q9H9R9 158 aa6.82□□□□□ -1.32
SPG11-208ENST00000558155 ECE2O60344 883 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 TBC1D8O95759 1140 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 VIL1P09327 827 aaKnown RBP6.81□□□□□ -1.32
SPG11-208ENST00000558155 PPP2R1AP30153 589 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 AIMP1Q12904 312 aaKnown RBP6.81□□□□□ -1.32
SPG11-208ENST00000558155 DOK7Q18PE1 504 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
SPG11-208ENST00000558155 FBXO46Q6PJ61 603 aaPredicted RBP6.81□□□□□ -1.32
SPG11-208ENST00000558155 COPS6Q7L5N1 327 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 RASAL3Q86YV0 1011 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 PLCD3Q8N3E9 789 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 ZNF296Q8WUU4 475 aaPredicted RBP6.81□□□□□ -1.32
SPG11-208ENST00000558155 NECTIN2Q92692 538 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 CDCA5Q96FF9 252 aa6.81□□□□□ -1.32
SPG11-208ENST00000558155 LAMB4A4D0S4 1761 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 ANKRD36CQ5JPF3 1778 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 GPR25O00155 361 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 EGFRP00533 1210 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 TM4SF4P48230 202 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 RPS8P62241 208 aaKnown RBP6.8□□□□□ -1.32
SPG11-208ENST00000558155 GPSM2P81274 684 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 MMRN1Q13201 1228 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 SCARF1Q14162 830 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 PDIA6Q15084 440 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 SF3B3Q15393 1217 aaKnown RBP6.8□□□□□ -1.32
SPG11-208ENST00000558155 NFE2L2Q16236 605 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 HABP4Q5JVS0 413 aaKnown RBP6.8□□□□□ -1.32
SPG11-208ENST00000558155 ANGEL2Q5VTE6 544 aaKnown RBP6.8□□□□□ -1.32
SPG11-208ENST00000558155 AGBL3Q8NEM8 1001 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 KCNQ5Q9NR82 932 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 BABAM1Q9NWV8 329 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 GGA3Q9NZ52 723 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 POLLQ9UGP5 575 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 TSPYL4Q9UJ04 414 aa6.8□□□□□ -1.32
SPG11-208ENST00000558155 UBE2Q2LH0YL09 131 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 FKTNO75072 461 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 PLCG2P16885 1265 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms