RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 HTTP42858 3142 aa23.26■■□□□ 1.31
LHX4-202ENST00000558139 G3V3G9 751 aa23.25■■□□□ 1.31
LHX4-202ENST00000558139 NF2P35240 595 aa23.25■■□□□ 1.31
LHX4-202ENST00000558139 DCAF8Q5TAQ9 597 aa23.25■■□□□ 1.31
LHX4-202ENST00000558139 ZC3H12CQ9C0D7 883 aaKnown RBP23.25■■□□□ 1.31
LHX4-202ENST00000558139 TRMT112Q9UI30 125 aaKnown RBP23.25■■□□□ 1.31
LHX4-202ENST00000558139 ERBB4Q15303 1308 aa23.25■■□□□ 1.31
LHX4-202ENST00000558139 KIAA0100Q14667 2235 aaKnown RBP23.25■■□□□ 1.31
LHX4-202ENST00000558139 EIF4A1P60842 406 aaKnown RBP23.24■■□□□ 1.31
LHX4-202ENST00000558139 OTUD5Q96G74 571 aa23.24■■□□□ 1.31
LHX4-202ENST00000558139 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
LHX4-202ENST00000558139 SH3TC1Q8TE82 1336 aa23.24■■□□□ 1.31
LHX4-202ENST00000558139 SZT2Q5T011 3432 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 H0YGN5 161 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 GPSM2P81274 684 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 PRAMEF18Q5VWM3 479 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 ERO1AQ96HE7 468 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 MYOZ2Q9NPC6 264 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 TRIOBPQ9H2D6 2365 aa23.23■■□□□ 1.31
LHX4-202ENST00000558139 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
LHX4-202ENST00000558139 USP17L8P0C7I0 530 aa23.22■■□□□ 1.31
LHX4-202ENST00000558139 INHBEP58166 350 aa23.22■■□□□ 1.31
LHX4-202ENST00000558139 RSBN1LQ6PCB5 846 aaPredicted RBP23.22■■□□□ 1.31
LHX4-202ENST00000558139 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
LHX4-202ENST00000558139 SCAF8Q9UPN6 1271 aaKnown RBP23.22■■□□□ 1.31
LHX4-202ENST00000558139 A0A0C4DFX4 3053 aa23.21■■□□□ 1.31
LHX4-202ENST00000558139 CENPFP49454 3210 aa23.21■■□□□ 1.31
LHX4-202ENST00000558139 TBC1D16Q8TBP0 767 aa23.21■■□□□ 1.31
LHX4-202ENST00000558139 LAMB4A4D0S4 1761 aa23.2■■□□□ 1.3
LHX4-202ENST00000558139 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.3
LHX4-202ENST00000558139 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.3
LHX4-202ENST00000558139 PTPN12Q05209 780 aaKnown RBP23.2■■□□□ 1.3
LHX4-202ENST00000558139 ARMC9Q7Z3E5 817 aa23.2■■□□□ 1.3
LHX4-202ENST00000558139 CELF1Q92879 486 aaKnown RBP23.2■■□□□ 1.3
LHX4-202ENST00000558139 SPRYD7Q5W111 196 aa23.19■■□□□ 1.3
LHX4-202ENST00000558139 CHRDL2Q6WN34 429 aa23.19■■□□□ 1.3
LHX4-202ENST00000558139 IFNL1Q8IU54 200 aa23.19■■□□□ 1.3
LHX4-202ENST00000558139 THUMPD2Q9BTF0 503 aaKnown RBP23.19■■□□□ 1.3
LHX4-202ENST00000558139 EFCC1Q9HA90 598 aa23.19■■□□□ 1.3
LHX4-202ENST00000558139 MANSC4A6NHS7 340 aaPredicted RBP23.18■■□□□ 1.3
LHX4-202ENST00000558139 CNGB1Q14028 1251 aaPredicted RBP23.18■■□□□ 1.3
LHX4-202ENST00000558139 BRCA2P51587 3418 aa23.17■■□□□ 1.3
LHX4-202ENST00000558139 ZNF609O15014 1411 aa23.16■■□□□ 1.3
LHX4-202ENST00000558139 LRP10Q7Z4F1 713 aa23.16■■□□□ 1.3
LHX4-202ENST00000558139 NBPF11Q86T75 865 aa23.16■■□□□ 1.3
LHX4-202ENST00000558139 CD99L2Q8TCZ2 262 aa23.16■■□□□ 1.3
LHX4-202ENST00000558139 GMLQ99445 158 aa23.16■■□□□ 1.3
LHX4-202ENST00000558139 ANKRD36CQ5JPF3 1778 aa23.16■■□□□ 1.3
LHX4-202ENST00000558139 SF3B3Q15393 1217 aaKnown RBP23.15■■□□□ 1.3
LHX4-202ENST00000558139 PRKG1Q13976 671 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 PDIA6Q15084 440 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 SLC4A8Q2Y0W8 1093 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 NBPF9Q3BBW0 867 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 LDLRAD1Q5T700 205 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 ZNF333Q96JL9 665 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 RBM27Q9P2N5 1060 aaKnown RBP23.14■■□□□ 1.29
LHX4-202ENST00000558139 RBBP6Q7Z6E9 1792 aaKnown RBP23.14■■□□□ 1.29
LHX4-202ENST00000558139 CEP290O15078 2479 aa23.14■■□□□ 1.29
LHX4-202ENST00000558139 RPS8P62241 208 aaKnown RBP23.13■■□□□ 1.29
LHX4-202ENST00000558139 SLC10A4Q96EP9 437 aa23.13■■□□□ 1.29
LHX4-202ENST00000558139 PODXL2Q9NZ53 605 aa23.13■■□□□ 1.29
LHX4-202ENST00000558139 LRRC37AA6NMS7 1700 aa23.13■■□□□ 1.29
LHX4-202ENST00000558139 UFL1O94874 794 aa23.12■■□□□ 1.29
LHX4-202ENST00000558139 EIF2S2P20042 333 aaKnown RBP23.12■■□□□ 1.29
LHX4-202ENST00000558139 OTUD7BQ6GQQ9 843 aa23.12■■□□□ 1.29
LHX4-202ENST00000558139 ANKIB1Q9P2G1 1089 aa23.12■■□□□ 1.29
LHX4-202ENST00000558139 USP17L3A6NCW0 530 aa23.11■■□□□ 1.29
LHX4-202ENST00000558139 USP17L4A6NCW7 530 aa23.11■■□□□ 1.29
LHX4-202ENST00000558139 SP3Q02447 781 aa23.11■■□□□ 1.29
LHX4-202ENST00000558139 AIMP1Q12904 312 aaKnown RBP23.11■■□□□ 1.29
LHX4-202ENST00000558139 COPS6Q7L5N1 327 aa23.11■■□□□ 1.29
LHX4-202ENST00000558139 USP17L1Q7RTZ2 530 aa23.11■■□□□ 1.29
LHX4-202ENST00000558139 GGA1Q9UJY5 639 aa23.11■■□□□ 1.29
LHX4-202ENST00000558139 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
LHX4-202ENST00000558139 IGF2BP3O00425 579 aaKnown RBP eCLIP23.1■■□□□ 1.29
LHX4-202ENST00000558139 ZBTB48P10074 688 aaPredicted RBP23.1■■□□□ 1.29
LHX4-202ENST00000558139 MNX1P50219 401 aaPredicted RBP23.1■■□□□ 1.29
LHX4-202ENST00000558139 ARHGEF6Q15052 776 aa23.1■■□□□ 1.29
LHX4-202ENST00000558139 SLC9C1Q4G0N8 1177 aa23.1■■□□□ 1.29
LHX4-202ENST00000558139 OGFOD1Q8N543 542 aa23.1■■□□□ 1.29
LHX4-202ENST00000558139 LAMB2P55268 1798 aa23.09■■□□□ 1.29
LHX4-202ENST00000558139 CUL9Q8IWT3 2517 aa23.09■■□□□ 1.29
LHX4-202ENST00000558139 ANXA1P04083 346 aa23.09■■□□□ 1.29
LHX4-202ENST00000558139 PROSER3Q2NL68 480 aa23.09■■□□□ 1.29
LHX4-202ENST00000558139 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.29
LHX4-202ENST00000558139 WNT10BO00744 389 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 NEFMP07197 916 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 CRHR2Q13324 411 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 XAGE3Q8WTP9 111 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 DPF3Q92784 378 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 ZNF428Q96B54 188 aa23.08■■□□□ 1.29
LHX4-202ENST00000558139 TAF1P21675 1872 aa23.07■■□□□ 1.28
LHX4-202ENST00000558139 FAM89AQ96GI7 184 aa23.07■■□□□ 1.28
LHX4-202ENST00000558139 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.07■■□□□ 1.28
LHX4-202ENST00000558139 SCN9AQ15858 1988 aa23.07■■□□□ 1.28
LHX4-202ENST00000558139 APOBEC3FQ8IUX4 373 aaKnown RBP23.05■■□□□ 1.28
LHX4-202ENST00000558139 WNK4Q96J92 1243 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms