RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
SPG11-205ENST00000558080 FER1L6Q2WGJ9 1857 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 ARFGEF2Q9Y6D5 1785 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 RIPK4P57078 832 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 NBPF10Q6P3W6 841 aaKnown RBP9.93□□□□□ -0.82
SPG11-205ENST00000558080 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 CCDC146Q8IYE0 955 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 NBPF15Q8N660 670 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
SPG11-205ENST00000558080 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 TMEM134Q9H6X4 195 aa9.93□□□□□ -0.82
SPG11-205ENST00000558080 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 H0YIN7 160 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 NPHP1O15259 732 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 EIF4A1P60842 406 aaKnown RBP9.92□□□□□ -0.82
SPG11-205ENST00000558080 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 C9orf131Q5VYM1 1079 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 PRR5LQ6MZQ0 368 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 RBM46Q8TBY0 533 aaKnown RBP9.92□□□□□ -0.82
SPG11-205ENST00000558080 RRP7AQ9Y3A4 280 aaKnown RBP9.92□□□□□ -0.82
SPG11-205ENST00000558080 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
SPG11-205ENST00000558080 RNF223E7ERA6 249 aa9.91□□□□□ -0.82
SPG11-205ENST00000558080 TMPOP42166 694 aaKnown RBP9.91□□□□□ -0.82
SPG11-205ENST00000558080 TTLL6Q8N841 843 aa9.91□□□□□ -0.82
SPG11-205ENST00000558080 ZNF622Q969S3 477 aaKnown RBP eCLIP9.91□□□□□ -0.82
SPG11-205ENST00000558080 TIAM2Q8IVF5 1701 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 FAM177BA6PVY3 158 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 PDE6BP35913 854 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 RASSF7Q02833 373 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 WDR43Q15061 677 aaKnown RBP eCLIP9.9□□□□□ -0.82
SPG11-205ENST00000558080 CNBD1Q8NA66 436 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 BRIP1Q9BX63 1249 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 TSPYL4Q9UJ04 414 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 ZNF652Q9Y2D9 606 aa9.9□□□□□ -0.82
SPG11-205ENST00000558080 ANKRD36CQ5JPF3 1778 aa9.89□□□□□ -0.83
SPG11-205ENST00000558080 ACTN4O43707 911 aaKnown RBP9.89□□□□□ -0.83
SPG11-205ENST00000558080 MYL6BP14649 208 aa9.89□□□□□ -0.83
SPG11-205ENST00000558080 ST5P78524 1137 aa9.89□□□□□ -0.83
SPG11-205ENST00000558080 HLFQ16534 295 aa9.89□□□□□ -0.83
SPG11-205ENST00000558080 CLEC4GQ6UXB4 293 aa9.89□□□□□ -0.83
SPG11-205ENST00000558080 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
SPG11-205ENST00000558080 EMID1Q96A84 441 aaPredicted RBP9.89□□□□□ -0.83
SPG11-205ENST00000558080 PRKRIP1Q9H875 184 aaPredicted RBP9.89□□□□□ -0.83
SPG11-205ENST00000558080 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
SPG11-205ENST00000558080 NIP7Q9Y221 180 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPG11-205ENST00000558080 TNRC6CQ9HCJ0 1690 aaKnown RBP9.88□□□□□ -0.83
SPG11-205ENST00000558080 EIF2S2P20042 333 aaKnown RBP9.88□□□□□ -0.83
SPG11-205ENST00000558080 LMOD3Q0VAK6 560 aa9.88□□□□□ -0.83
SPG11-205ENST00000558080 KMT5BQ4FZB7 885 aa9.88□□□□□ -0.83
SPG11-205ENST00000558080 TTLL7Q6ZT98 887 aa9.88□□□□□ -0.83
SPG11-205ENST00000558080 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
SPG11-205ENST00000558080 RUNDC1Q96C34 613 aa9.88□□□□□ -0.83
SPG11-205ENST00000558080 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
SPG11-205ENST00000558080 LAS1LQ9Y4W2 734 aaKnown RBP9.88□□□□□ -0.83
SPG11-205ENST00000558080 TAF1P21675 1872 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 RCCD1A6NED2 376 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 C21orf2O43822 256 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 TLL1O43897 1013 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 SLC19A1P41440 591 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 NMRK2Q9NPI5 230 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 LAMB2P55268 1798 aa9.87□□□□□ -0.83
SPG11-205ENST00000558080 SRGNP10124 158 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
SPG11-205ENST00000558080 PRELPP51888 382 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 STYK1Q6J9G0 422 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 TPTE2Q6XPS3 522 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 KIF6Q6ZMV9 814 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 ANKLE1Q8NAG6 615 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
SPG11-205ENST00000558080 MAP3K15Q6ZN16 1313 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 ERVV-1B6SEH8 477 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 NFKBIEO00221 500 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 ANXA1P04083 346 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 CFHP08603 1231 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 LMNB1P20700 586 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 GPTP24298 496 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 KRT24Q2M2I5 525 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 CNKSR1Q969H4 720 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 MASTLQ96GX5 879 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 RRAGCQ9HB90 399 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
SPG11-205ENST00000558080 KDM2BQ8NHM5 1336 aa9.84□□□□□ -0.83
SPG11-205ENST00000558080 CHL1O00533 1208 aa9.84□□□□□ -0.83
SPG11-205ENST00000558080 PROSER3Q2NL68 480 aa9.84□□□□□ -0.83
SPG11-205ENST00000558080 SPRYD7Q5W111 196 aa9.84□□□□□ -0.83
SPG11-205ENST00000558080 ZNF787Q6DD87 383 aa9.84□□□□□ -0.83
SPG11-205ENST00000558080 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
SPG11-205ENST00000558080 NUTM1Q86Y26 1132 aa9.84□□□□□ -0.83
SPG11-205ENST00000558080 ERBB4Q15303 1308 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 APAF1O14727 1248 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 NPR1P16066 1061 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 PRR20EP86478 221 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 PRR20CP86479 221 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 PRR20DP86480 221 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 PRR20BP86481 221 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 PRR20AP86496 221 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 AIMP1Q12904 312 aaKnown RBP9.83□□□□□ -0.84
SPG11-205ENST00000558080 FAM161AQ3B820 660 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms