RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CHD1LQ86WJ1 897 aa15.29■□□□□ 0.04
TPM1-209ENST00000558072 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
TPM1-209ENST00000558072 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
TPM1-209ENST00000558072 GPR108Q9NPR9 543 aa15.29■□□□□ 0.04
TPM1-209ENST00000558072 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
TPM1-209ENST00000558072 CEP126Q9P2H0 1117 aa15.29■□□□□ 0.04
TPM1-209ENST00000558072 RPS8P62241 208 aaKnown RBP15.28■□□□□ 0.04
TPM1-209ENST00000558072 GRAPQ13588 217 aa15.28■□□□□ 0.04
TPM1-209ENST00000558072 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
TPM1-209ENST00000558072 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
TPM1-209ENST00000558072 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
TPM1-209ENST00000558072 MASTLQ96GX5 879 aa15.28■□□□□ 0.04
TPM1-209ENST00000558072 BSDC1Q9NW68 430 aaPredicted RBP15.28■□□□□ 0.04
TPM1-209ENST00000558072 EXOC6BQ9Y2D4 811 aa15.28■□□□□ 0.04
TPM1-209ENST00000558072 SRGNP10124 158 aa15.27■□□□□ 0.04
TPM1-209ENST00000558072 KCNA3P22001 575 aa15.27■□□□□ 0.04
TPM1-209ENST00000558072 STYK1Q6J9G0 422 aa15.27■□□□□ 0.04
TPM1-209ENST00000558072 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
TPM1-209ENST00000558072 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
TPM1-209ENST00000558072 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.04
TPM1-209ENST00000558072 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
TPM1-209ENST00000558072 TGFB2P61812 414 aa15.26■□□□□ 0.03
TPM1-209ENST00000558072 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
TPM1-209ENST00000558072 CNKSR1Q969H4 720 aa15.26■□□□□ 0.03
TPM1-209ENST00000558072 SIL1Q9H173 461 aa15.26■□□□□ 0.03
TPM1-209ENST00000558072 METTL24Q5JXM2 366 aa15.25■□□□□ 0.03
TPM1-209ENST00000558072 IFIT2P09913 472 aaKnown RBP15.24■□□□□ 0.03
TPM1-209ENST00000558072 LRRC24Q50LG9 513 aa15.24■□□□□ 0.03
TPM1-209ENST00000558072 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
TPM1-209ENST00000558072 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
TPM1-209ENST00000558072 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
TPM1-209ENST00000558072 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
TPM1-209ENST00000558072 APBB1O00213 710 aa15.23■□□□□ 0.03
TPM1-209ENST00000558072 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
TPM1-209ENST00000558072 PRPF40BQ6NWY9 871 aaKnown RBP15.23■□□□□ 0.03
TPM1-209ENST00000558072 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
TPM1-209ENST00000558072 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
TPM1-209ENST00000558072 BCL11AQ9H165 835 aa15.23■□□□□ 0.03
TPM1-209ENST00000558072 PPEF1O14829 653 aaPredicted RBP15.22■□□□□ 0.03
TPM1-209ENST00000558072 ERC2O15083 957 aa15.22■□□□□ 0.03
TPM1-209ENST00000558072 PDE8BO95263 885 aa15.22■□□□□ 0.03
TPM1-209ENST00000558072 ATG9AQ7Z3C6 839 aa15.22■□□□□ 0.03
TPM1-209ENST00000558072 GPR101Q96P66 508 aaPredicted RBP15.22■□□□□ 0.03
TPM1-209ENST00000558072 AOX1Q06278 1338 aa15.21■□□□□ 0.03
TPM1-209ENST00000558072 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
TPM1-209ENST00000558072 DUOX1Q9NRD9 1551 aa15.21■□□□□ 0.03
TPM1-209ENST00000558072 SNAP23O00161 211 aa15.21■□□□□ 0.03
TPM1-209ENST00000558072 SASH1O94885 1247 aa15.21■□□□□ 0.03
TPM1-209ENST00000558072 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.03
TPM1-209ENST00000558072 PUM3Q15397 648 aaKnown RBP15.21■□□□□ 0.03
TPM1-209ENST00000558072 SOGA3Q5TF21 947 aa15.21■□□□□ 0.03
TPM1-209ENST00000558072 HELBQ8NG08 1087 aaPredicted RBP15.21■□□□□ 0.03
TPM1-209ENST00000558072 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 SLC5A1P13866 664 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 TFCP2Q12800 502 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 UBE4AQ14139 1066 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 TNNI3KQ59H18 835 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 AACSQ86V21 672 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 SP8Q8IXZ3 490 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 LPIN2Q92539 896 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 BCS1LQ9Y276 419 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 LEMD3Q9Y2U8 911 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 FPGT-TNNI3KV9GXZ4 949 aa15.2■□□□□ 0.02
TPM1-209ENST00000558072 C21orf2O43822 256 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
TPM1-209ENST00000558072 KCNJ4P48050 445 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 CHRNDQ07001 517 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 CCDC158Q5M9N0 1113 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 IL1RAPL2Q9NP60 686 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 MINPP1Q9UNW1 487 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 ARFGEF1Q9Y6D6 1849 aa15.19■□□□□ 0.02
TPM1-209ENST00000558072 XDHP47989 1333 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
TPM1-209ENST00000558072 TAF5LO75529 589 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
TPM1-209ENST00000558072 MX1P20591 662 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 ATP2B4P23634 1241 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 SKAP1Q86WV1 359 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 TTLL6Q8N841 843 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
TPM1-209ENST00000558072 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 GLRX3O76003 335 aaKnown RBP15.17■□□□□ 0.02
TPM1-209ENST00000558072 KLRK1P26718 216 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 GPSM2P81274 684 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 CAVIN4Q5BKX8 364 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 ECHDC1Q9NTX5 307 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
TPM1-209ENST00000558072 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 PIM2Q9P1W9 311 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
TPM1-209ENST00000558072 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
TPM1-209ENST00000558072 RGS3P49796 1198 aa15.16■□□□□ 0.02
TPM1-209ENST00000558072 RASSF7Q02833 373 aa15.16■□□□□ 0.02
TPM1-209ENST00000558072 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms