RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 A1BGP04217 495 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
CPNE6-204ENST00000557829 ME3Q16798 604 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 RNF20Q5VTR2 975 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 DNAJC10Q8IXB1 793 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 FAM13BQ9NYF5 915 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 RBM8AQ9Y5S9 174 aaKnown RBP15.68■□□□□ 0.1
CPNE6-204ENST00000557829 CCDC192P0DO97 292 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 KRT85P78386 507 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 ST3GAL1Q11201 340 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 TSGA10IPQ3SY00 556 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 PTF1AQ7RTS3 328 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 AACSQ86V21 672 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
CPNE6-204ENST00000557829 DDX58O95786 925 aaKnown RBP15.67■□□□□ 0.1
CPNE6-204ENST00000557829 CPA1P15085 419 aa15.67■□□□□ 0.1
CPNE6-204ENST00000557829 G3BP1Q13283 466 aaKnown RBP eCLIP15.67■□□□□ 0.1
CPNE6-204ENST00000557829 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
CPNE6-204ENST00000557829 GRM8O00222 908 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 LARP1BQ659C4 914 aaKnown RBP15.66■□□□□ 0.1
CPNE6-204ENST00000557829 COPS6Q7L5N1 327 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 SMAP1Q8IYB5 467 aaPredicted RBP15.66■□□□□ 0.1
CPNE6-204ENST00000557829 LARP6Q9BRS8 491 aaKnown RBP15.66■□□□□ 0.1
CPNE6-204ENST00000557829 HMG20BQ9P0W2 317 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 GOLGA6L6A8MZA4 724 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 SLC27A2O14975 620 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 GIMAP6Q6P9H5 292 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 KRT27Q7Z3Y8 459 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 TPCN1Q9ULQ1 816 aa15.66■□□□□ 0.1
CPNE6-204ENST00000557829 SOCS7O14512 581 aa15.65■□□□□ 0.1
CPNE6-204ENST00000557829 SASH1O94885 1247 aa15.65■□□□□ 0.1
CPNE6-204ENST00000557829 NMIQ13287 307 aaPredicted RBP15.65■□□□□ 0.1
CPNE6-204ENST00000557829 DNTTIP2Q5QJE6 756 aaKnown RBP15.65■□□□□ 0.1
CPNE6-204ENST00000557829 SCAND2PQ9GZW5 306 aaPredicted RBP15.65■□□□□ 0.1
CPNE6-204ENST00000557829 PA2G4Q9UQ80 394 aaKnown RBP15.65■□□□□ 0.1
CPNE6-204ENST00000557829 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
CPNE6-204ENST00000557829 VPS37CA5D8V6 355 aaPredicted RBP15.64■□□□□ 0.09
CPNE6-204ENST00000557829 KCNJ4P48050 445 aa15.64■□□□□ 0.09
CPNE6-204ENST00000557829 BLOC1S2Q6QNY1 142 aa15.64■□□□□ 0.09
CPNE6-204ENST00000557829 EAF2Q96CJ1 260 aaPredicted RBP15.64■□□□□ 0.09
CPNE6-204ENST00000557829 RPS6KB1P23443 525 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 CWF19L2Q2TBE0 894 aaKnown RBP15.63■□□□□ 0.09
CPNE6-204ENST00000557829 FAM200AQ8TCP9 573 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 KAZALD1Q96I82 304 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 SUCLG2Q96I99 432 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 TTC12Q9H892 705 aaPredicted RBP15.63■□□□□ 0.09
CPNE6-204ENST00000557829 RFX7Q2KHR2 1363 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 TTC6Q86TZ1 520 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 KIAA1524Q8TCG1 905 aa15.63■□□□□ 0.09
CPNE6-204ENST00000557829 KRT32Q14532 448 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 RBM43Q6ZSC3 357 aaKnown RBP15.62■□□□□ 0.09
CPNE6-204ENST00000557829 RIC3Q7Z5B4 369 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 NECAB1Q8N987 351 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 FAM227BQ96M60 508 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 ZNF830Q96NB3 372 aaPredicted RBP15.62■□□□□ 0.09
CPNE6-204ENST00000557829 TEX13AQ9BXU3 409 aaPredicted RBP15.62■□□□□ 0.09
CPNE6-204ENST00000557829 NUP62CLQ9H1M0 184 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 CYP19A1P11511 503 aaPredicted RBP15.62■□□□□ 0.09
CPNE6-204ENST00000557829 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 TTLL7Q6ZT98 887 aa15.62■□□□□ 0.09
CPNE6-204ENST00000557829 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
CPNE6-204ENST00000557829 DDX19AQ9NUU7 478 aaKnown RBP15.62■□□□□ 0.09
CPNE6-204ENST00000557829 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
CPNE6-204ENST00000557829 STARD3NLO95772 234 aa15.61■□□□□ 0.09
CPNE6-204ENST00000557829 SIK1P57059 783 aa15.61■□□□□ 0.09
CPNE6-204ENST00000557829 ANKRD13DQ6ZTN6 518 aa15.61■□□□□ 0.09
CPNE6-204ENST00000557829 UPF1Q92900 1129 aaKnown RBP eCLIP15.6■□□□□ 0.09
CPNE6-204ENST00000557829 FSD1Q9BTV5 496 aa15.6■□□□□ 0.09
CPNE6-204ENST00000557829 AP5Z1O43299 807 aa15.6■□□□□ 0.09
CPNE6-204ENST00000557829 CAVIN2O95810 425 aa15.6■□□□□ 0.09
CPNE6-204ENST00000557829 ITPK1Q13572 414 aa15.6■□□□□ 0.09
CPNE6-204ENST00000557829 TJP1Q07157 1748 aa15.6■□□□□ 0.09
CPNE6-204ENST00000557829 COL15A1P39059 1388 aa15.6■□□□□ 0.09
CPNE6-204ENST00000557829 A0A0D9SFI3 127 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 IGKV5-2P06315 115 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 ATP6V1AP38606 617 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 TOB2Q14106 344 aaPredicted RBP15.59■□□□□ 0.09
CPNE6-204ENST00000557829 CDC37L1Q7L3B6 337 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 TICAM2Q86XR7 235 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
CPNE6-204ENST00000557829 ATP5JP18859 108 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 TYRO3Q06418 890 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 SMARCC1Q92922 1105 aaPredicted RBP15.59■□□□□ 0.09
CPNE6-204ENST00000557829 MYD88Q99836 296 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 ZNF330Q9Y3S2 320 aaPredicted RBP15.59■□□□□ 0.09
CPNE6-204ENST00000557829 MRVI1Q9Y6F6 885 aa15.59■□□□□ 0.09
CPNE6-204ENST00000557829 TAF5LO75529 589 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 NEXNQ0ZGT2 675 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 UTP14CQ5TAP6 766 aaKnown RBP15.58■□□□□ 0.08
CPNE6-204ENST00000557829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.58■□□□□ 0.08
CPNE6-204ENST00000557829 PLBD2Q8NHP8 589 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 METTL22Q9BUU2 404 aaPredicted RBP15.58■□□□□ 0.08
CPNE6-204ENST00000557829 TNMDQ9H2S6 317 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 KCNF1Q9H3M0 494 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 COPRSQ9NQ92 184 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 PRDM4Q9UKN5 801 aa15.58■□□□□ 0.08
CPNE6-204ENST00000557829 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms