RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
CHD8-214ENST00000557727 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
CHD8-214ENST00000557727 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
CHD8-214ENST00000557727 GCKRQ14397 625 aa11.47□□□□□ -0.57
CHD8-214ENST00000557727 UTP14AQ9BVJ6 771 aaKnown RBP11.47□□□□□ -0.57
CHD8-214ENST00000557727 BRIP1Q9BX63 1249 aa11.47□□□□□ -0.57
CHD8-214ENST00000557727 RCAN3Q9UKA8 241 aa11.47□□□□□ -0.57
CHD8-214ENST00000557727 SPEF2Q9C093 1822 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 H7C1W4 665 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
CHD8-214ENST00000557727 RLBP1P12271 317 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 CHRNA5P30532 468 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 CRY2Q49AN0 593 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 ATF7IPQ6VMQ6 1270 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 TPTE2Q6XPS3 522 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 ZBTB38Q8NAP3 1195 aaPredicted RBP11.46□□□□□ -0.57
CHD8-214ENST00000557727 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
CHD8-214ENST00000557727 CWC25Q9NXE8 425 aaPredicted RBP11.46□□□□□ -0.57
CHD8-214ENST00000557727 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.58
CHD8-214ENST00000557727 A0A1B0GUL6 1792 aa11.46□□□□□ -0.58
CHD8-214ENST00000557727 UTYO14607 1347 aa11.45□□□□□ -0.58
CHD8-214ENST00000557727 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
CHD8-214ENST00000557727 CDHR2Q9BYE9 1310 aa11.45□□□□□ -0.58
CHD8-214ENST00000557727 DPEP1P16444 411 aa11.45□□□□□ -0.58
CHD8-214ENST00000557727 TGFB2P61812 414 aa11.45□□□□□ -0.58
CHD8-214ENST00000557727 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
CHD8-214ENST00000557727 KAZALD1Q96I82 304 aa11.45□□□□□ -0.58
CHD8-214ENST00000557727 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
CHD8-214ENST00000557727 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
CHD8-214ENST00000557727 SBF1O95248 1867 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 LTBP1Q14766 1721 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 SRGNP10124 158 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 HCLS1P14317 486 aaPredicted RBP11.44□□□□□ -0.58
CHD8-214ENST00000557727 ST5P78524 1137 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 NEXNQ0ZGT2 675 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 INTS3Q68E01 1043 aaKnown RBP11.44□□□□□ -0.58
CHD8-214ENST00000557727 API5Q9BZZ5 524 aaKnown RBP11.44□□□□□ -0.58
CHD8-214ENST00000557727 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
CHD8-214ENST00000557727 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 CCDC88AQ3V6T2 1871 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 ARHGAP33O14559 1287 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 NBPF7P0C2Y1 421 aaPredicted RBP11.43□□□□□ -0.58
CHD8-214ENST00000557727 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
CHD8-214ENST00000557727 ZKSCAN2Q63HK3 967 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 UBE3BQ7Z3V4 1068 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 FRAT1Q92837 279 aaPredicted RBP11.43□□□□□ -0.58
CHD8-214ENST00000557727 PLA2G12BQ9BX93 195 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
CHD8-214ENST00000557727 GRM8O00222 908 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 IRS4O14654 1257 aaPredicted RBP11.42□□□□□ -0.58
CHD8-214ENST00000557727 PLIN1O60240 522 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 HOXA10P31260 410 aaPredicted RBP11.42□□□□□ -0.58
CHD8-214ENST00000557727 PDE6BP35913 854 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 SLC51AQ86UW1 340 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 C2CD5Q86YS7 1000 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 TMEM57Q8N5G2 664 aa11.42□□□□□ -0.58
CHD8-214ENST00000557727 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
CHD8-214ENST00000557727 TBC1D12O60347 775 aa11.41□□□□□ -0.58
CHD8-214ENST00000557727 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHD8-214ENST00000557727 CCT4P50991 539 aaKnown RBP11.41□□□□□ -0.58
CHD8-214ENST00000557727 FOXO4P98177 505 aa11.41□□□□□ -0.58
CHD8-214ENST00000557727 DSG2Q14126 1118 aa11.41□□□□□ -0.58
CHD8-214ENST00000557727 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
CHD8-214ENST00000557727 CLUAP1Q96AJ1 413 aa11.41□□□□□ -0.58
CHD8-214ENST00000557727 CHD4Q14839 1912 aa11.41□□□□□ -0.58
CHD8-214ENST00000557727 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
CHD8-214ENST00000557727 CSF1RP07333 972 aa11.4□□□□□ -0.58
CHD8-214ENST00000557727 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
CHD8-214ENST00000557727 C20orf194Q5TEA3 1177 aa11.4□□□□□ -0.58
CHD8-214ENST00000557727 STYK1Q6J9G0 422 aa11.4□□□□□ -0.58
CHD8-214ENST00000557727 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
CHD8-214ENST00000557727 C7orf43Q8WVR3 580 aa11.4□□□□□ -0.58
CHD8-214ENST00000557727 RYDENQ9NUL5 291 aaKnown RBP11.4□□□□□ -0.58
CHD8-214ENST00000557727 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
CHD8-214ENST00000557727 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
CHD8-214ENST00000557727 H0YIN7 160 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 PDE8AO60658 829 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 NPR1P16066 1061 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 CTSWP56202 376 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 DZIP1LQ8IYY4 767 aaKnown RBP11.39□□□□□ -0.59
CHD8-214ENST00000557727 ANKRD44Q8N8A2 993 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 MASTLQ96GX5 879 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 MEIS3Q99687 375 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 DUOX1Q9NRD9 1551 aa11.39□□□□□ -0.59
CHD8-214ENST00000557727 NPHP1O15259 732 aa11.38□□□□□ -0.59
CHD8-214ENST00000557727 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
CHD8-214ENST00000557727 ADGRD1Q6QNK2 874 aa11.38□□□□□ -0.59
CHD8-214ENST00000557727 CRAMP1Q96RY5 1269 aa11.38□□□□□ -0.59
CHD8-214ENST00000557727 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms