RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CELF1Q92879 486 aaKnown RBP21.38■■□□□ 1.01
NEK9-211ENST00000557673 DBNDD1Q9H9R9 158 aa21.38■■□□□ 1.01
NEK9-211ENST00000557673 RIMBP2O15034 1052 aa21.37■■□□□ 1.01
NEK9-211ENST00000557673 RPS8P62241 208 aaKnown RBP21.37■■□□□ 1.01
NEK9-211ENST00000557673 TSR2Q969E8 191 aaKnown RBP21.37■■□□□ 1.01
NEK9-211ENST00000557673 DCPSQ96C86 337 aaKnown RBP21.37■■□□□ 1.01
NEK9-211ENST00000557673 POLLQ9UGP5 575 aa21.37■■□□□ 1.01
NEK9-211ENST00000557673 DUOX1Q9NRD9 1551 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 LRRC37AA6NMS7 1700 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 SHTN1A0MZ66 631 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
NEK9-211ENST00000557673 ECE2O60344 883 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 GPSM2P81274 684 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 SAMD7Q7Z3H4 446 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 C2orf69Q8N8R5 385 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
NEK9-211ENST00000557673 ZC3H12CQ9C0D7 883 aaKnown RBP21.36■■□□□ 1.01
NEK9-211ENST00000557673 G3V3G9 751 aa21.35■■□□□ 1.01
NEK9-211ENST00000557673 MLLT1Q03111 559 aaPredicted RBP21.35■■□□□ 1.01
NEK9-211ENST00000557673 TBC1D10BQ4KMP7 808 aaPredicted RBP21.35■■□□□ 1.01
NEK9-211ENST00000557673 DCAF8Q5TAQ9 597 aa21.35■■□□□ 1.01
NEK9-211ENST00000557673 SLC34A2O95436 690 aa21.34■■□□□ 1.01
NEK9-211ENST00000557673 RGS19P49795 217 aa21.34■■□□□ 1.01
NEK9-211ENST00000557673 GOLGA2Q08379 1002 aa21.34■■□□□ 1.01
NEK9-211ENST00000557673 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
NEK9-211ENST00000557673 RIC3Q7Z5B4 369 aa21.34■■□□□ 1.01
NEK9-211ENST00000557673 ZBTB38Q8NAP3 1195 aaPredicted RBP21.34■■□□□ 1.01
NEK9-211ENST00000557673 TBC1D16Q8TBP0 767 aa21.34■■□□□ 1.01
NEK9-211ENST00000557673 CCDC102AQ96A19 550 aa21.34■■□□□ 1.01
NEK9-211ENST00000557673 GBA2Q9HCG7 927 aaPredicted RBP21.34■■□□□ 1.01
NEK9-211ENST00000557673 TAF1P21675 1872 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 DOK7Q18PE1 504 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 RGMBQ6NW40 437 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 TSPYL6Q8N831 410 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 CHMP4AQ9BY43 222 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 MCOLN1Q9GZU1 580 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 PODXL2Q9NZ53 605 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 ANKIB1Q9P2G1 1089 aa21.33■■□□□ 1.01
NEK9-211ENST00000557673 DDX60Q8IY21 1712 aaKnown RBP21.32■■□□□ 1
NEK9-211ENST00000557673 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
NEK9-211ENST00000557673 VIL1P09327 827 aaKnown RBP21.32■■□□□ 1
NEK9-211ENST00000557673 RBM26Q5T8P6 1007 aaKnown RBP21.32■■□□□ 1
NEK9-211ENST00000557673 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
NEK9-211ENST00000557673 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
NEK9-211ENST00000557673 SULF1Q8IWU6 871 aa21.31■■□□□ 1
NEK9-211ENST00000557673 KIF4BQ2VIQ3 1234 aa21.3■■□□□ 1
NEK9-211ENST00000557673 SPINK5Q9NQ38 1064 aaPredicted RBP21.3■■□□□ 1
NEK9-211ENST00000557673 KCNQ5Q9NR82 932 aa21.3■■□□□ 1
NEK9-211ENST00000557673 SAGE1Q9NXZ1 904 aa21.3■■□□□ 1
NEK9-211ENST00000557673 GGA1Q9UJY5 639 aa21.3■■□□□ 1
NEK9-211ENST00000557673 RTL9Q8NET4 1388 aa21.3■■□□□ 1
NEK9-211ENST00000557673 UFL1O94874 794 aa21.29■■□□□ 1
NEK9-211ENST00000557673 EGFRP00533 1210 aa21.29■■□□□ 1
NEK9-211ENST00000557673 ZNF157P51786 506 aaPredicted RBP21.29■■□□□ 1
NEK9-211ENST00000557673 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
NEK9-211ENST00000557673 DGKZQ13574 1117 aa21.29■■□□□ 1
NEK9-211ENST00000557673 CCDC191Q8NCU4 936 aa21.29■■□□□ 1
NEK9-211ENST00000557673 ADM5C9JUS6 153 aa21.28■■□□□ 1
NEK9-211ENST00000557673 CCDC30Q5VVM6 783 aa21.28■■□□□ 1
NEK9-211ENST00000557673 AGBL3Q8NEM8 1001 aa21.28■■□□□ 1
NEK9-211ENST00000557673 FAM155AB1AL88 458 aaPredicted RBP21.27■■□□□ 1
NEK9-211ENST00000557673 PDE8AO60658 829 aa21.27■■□□□ 1
NEK9-211ENST00000557673 DDX58O95786 925 aaKnown RBP21.27■■□□□ 1
NEK9-211ENST00000557673 PCCAP05165 728 aaPredicted RBP21.27■■□□□ 1
NEK9-211ENST00000557673 DLK2Q6UY11 383 aa21.27■■□□□ 1
NEK9-211ENST00000557673 ZIC5Q96T25 663 aa21.27■■□□□ 1
NEK9-211ENST00000557673 SEC31BQ9NQW1 1179 aa21.27■■□□□ 1
NEK9-211ENST00000557673 GGA3Q9NZ52 723 aa21.27■■□□□ 1
NEK9-211ENST00000557673 REM2Q8IYK8 340 aaPredicted RBP21.26■□□□□ 0.99
NEK9-211ENST00000557673 MYD88Q99836 296 aa21.26■□□□□ 0.99
NEK9-211ENST00000557673 MYH16Q9H6N6 1097 aa21.26■□□□□ 0.99
NEK9-211ENST00000557673 CWC25Q9NXE8 425 aaPredicted RBP21.26■□□□□ 0.99
NEK9-211ENST00000557673 CASP8AP2Q9UKL3 1982 aa21.26■□□□□ 0.99
NEK9-211ENST00000557673 ZNF280AP59817 542 aaPredicted RBP21.25■□□□□ 0.99
NEK9-211ENST00000557673 KIF23Q02241 960 aaPredicted RBP21.25■□□□□ 0.99
NEK9-211ENST00000557673 TWISTNBQ3B726 338 aaPredicted RBP21.25■□□□□ 0.99
NEK9-211ENST00000557673 RSBN1LQ6PCB5 846 aaPredicted RBP21.25■□□□□ 0.99
NEK9-211ENST00000557673 ANKRD18AQ8IVF6 992 aa21.25■□□□□ 0.99
NEK9-211ENST00000557673 CACNA1FO60840 1977 aa21.25■□□□□ 0.99
NEK9-211ENST00000557673 XDHP47989 1333 aa21.24■□□□□ 0.99
NEK9-211ENST00000557673 ZBED9Q6R2W3 1325 aa21.24■□□□□ 0.99
NEK9-211ENST00000557673 ZNF609O15014 1411 aa21.23■□□□□ 0.99
NEK9-211ENST00000557673 E9PSI1 815 aa21.23■□□□□ 0.99
NEK9-211ENST00000557673 FKBP1BP68106 108 aa21.23■□□□□ 0.99
NEK9-211ENST00000557673 SCARF1Q14162 830 aa21.23■□□□□ 0.99
NEK9-211ENST00000557673 PODNQ7Z5L7 613 aa21.23■□□□□ 0.99
NEK9-211ENST00000557673 CDCA5Q96FF9 252 aa21.23■□□□□ 0.99
NEK9-211ENST00000557673 SLC10A3P09131 477 aa21.22■□□□□ 0.99
NEK9-211ENST00000557673 USP17L8P0C7I0 530 aa21.22■□□□□ 0.99
NEK9-211ENST00000557673 ATP2B4P23634 1241 aa21.22■□□□□ 0.99
NEK9-211ENST00000557673 CDC5LQ99459 802 aaKnown RBP21.22■□□□□ 0.99
NEK9-211ENST00000557673 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
NEK9-211ENST00000557673 STK31Q9BXU1 1019 aa21.22■□□□□ 0.99
NEK9-211ENST00000557673 RNF186Q9NXI6 227 aa21.22■□□□□ 0.99
NEK9-211ENST00000557673 POLR2AP24928 1970 aaKnown RBP21.22■□□□□ 0.99
NEK9-211ENST00000557673 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
NEK9-211ENST00000557673 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
NEK9-211ENST00000557673 TRPA1O75762 1119 aa21.21■□□□□ 0.99
NEK9-211ENST00000557673 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms