RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 PDE1AP54750 535 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-212ENST00000557641 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-212ENST00000557641 SIL1Q9H173 461 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 GREM2Q9H772 168 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 IL1RAPL2Q9NP60 686 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
GABRB3-212ENST00000557641 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 LDHAL6AQ6ZMR3 332 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 ATG9AQ7Z3C6 839 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 KLHDC4Q8TBB5 520 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
GABRB3-212ENST00000557641 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
GABRB3-212ENST00000557641 ERC2O15083 957 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 SERPINB2P05120 415 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
GABRB3-212ENST00000557641 ST5P78524 1137 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
GABRB3-212ENST00000557641 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
GABRB3-212ENST00000557641 TFCP2Q12800 502 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 TNNI3KQ59H18 835 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 AACSQ86V21 672 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 RIPOR2Q9Y4F9 1068 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 FPGT-TNNI3KV9GXZ4 949 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 MROH5Q6ZUA9 1318 aa12.55□□□□□ -0.4
GABRB3-212ENST00000557641 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
GABRB3-212ENST00000557641 LRRC24Q50LG9 513 aa12.54□□□□□ -0.4
GABRB3-212ENST00000557641 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
GABRB3-212ENST00000557641 DEFB132Q7Z7B7 95 aa12.54□□□□□ -0.4
GABRB3-212ENST00000557641 OTUD7AQ8TE49 926 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-212ENST00000557641 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
GABRB3-212ENST00000557641 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-212ENST00000557641 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-212ENST00000557641 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-212ENST00000557641 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-212ENST00000557641 ABCC12Q96J65 1359 aa12.54□□□□□ -0.4
GABRB3-212ENST00000557641 LAMB2P55268 1798 aa12.53□□□□□ -0.4
GABRB3-212ENST00000557641 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
GABRB3-212ENST00000557641 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
GABRB3-212ENST00000557641 ANKRD18AQ8IVF6 992 aa12.53□□□□□ -0.4
GABRB3-212ENST00000557641 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
GABRB3-212ENST00000557641 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
GABRB3-212ENST00000557641 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-212ENST00000557641 DDR1Q08345 913 aa12.52□□□□□ -0.41
GABRB3-212ENST00000557641 METTL24Q5JXM2 366 aa12.52□□□□□ -0.41
GABRB3-212ENST00000557641 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
GABRB3-212ENST00000557641 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.41
GABRB3-212ENST00000557641 BCL11AQ9H165 835 aa12.52□□□□□ -0.41
GABRB3-212ENST00000557641 BSDC1Q9NW68 430 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-212ENST00000557641 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-212ENST00000557641 CDC45O75419 566 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 PDE8BO95263 885 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 GSPT1P15170 499 aaKnown RBP12.51□□□□□ -0.41
GABRB3-212ENST00000557641 RPS8P62241 208 aaKnown RBP12.51□□□□□ -0.41
GABRB3-212ENST00000557641 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 PI4K2BQ8TCG2 481 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-212ENST00000557641 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 LRP5O75197 1615 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 QSER1Q2KHR3 1735 aa12.51□□□□□ -0.41
GABRB3-212ENST00000557641 DDX60Q8IY21 1712 aaKnown RBP12.51□□□□□ -0.41
GABRB3-212ENST00000557641 MYH3P11055 1940 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 A0A1B0GUL7 405 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 MMP10P09238 476 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 ATP5JP18859 108 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 SDSP20132 328 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 ATP2B3Q16720 1220 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-212ENST00000557641 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.5□□□□□ -0.41
GABRB3-212ENST00000557641 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
GABRB3-212ENST00000557641 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
GABRB3-212ENST00000557641 DBNLQ9UJU6 430 aaKnown RBP12.5□□□□□ -0.41
GABRB3-212ENST00000557641 ZNF609O15014 1411 aa12.5□□□□□ -0.41
GABRB3-212ENST00000557641 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-212ENST00000557641 PDE6BP35913 854 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 GRAPQ13588 217 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 PUM3Q15397 648 aaKnown RBP12.49□□□□□ -0.41
GABRB3-212ENST00000557641 CCDC158Q5M9N0 1113 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 TMC4Q7Z404 712 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-212ENST00000557641 LPIN2Q92539 896 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 NEUROD6Q96NK8 337 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms