RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 PITPNM2Q9BZ72 1349 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 ECE2O60344 883 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 PPP2R1AP30153 589 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 NOM1Q5C9Z4 860 aaKnown RBP9.63□□□□□ -0.87
PRKCH-225ENST00000557559 NECTIN2Q92692 538 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 CDCA5Q96FF9 252 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 NSFL1CQ9UNZ2 370 aaKnown RBP9.63□□□□□ -0.87
PRKCH-225ENST00000557559 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
PRKCH-225ENST00000557559 G3V3G9 751 aa9.62□□□□□ -0.87
PRKCH-225ENST00000557559 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
PRKCH-225ENST00000557559 RBM26Q5T8P6 1007 aaKnown RBP9.62□□□□□ -0.87
PRKCH-225ENST00000557559 DCAF8Q5TAQ9 597 aa9.62□□□□□ -0.87
PRKCH-225ENST00000557559 FBXO46Q6PJ61 603 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-225ENST00000557559 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
PRKCH-225ENST00000557559 BABAM1Q9NWV8 329 aa9.62□□□□□ -0.87
PRKCH-225ENST00000557559 RTL9Q8NET4 1388 aa9.62□□□□□ -0.87
PRKCH-225ENST00000557559 EGFRP00533 1210 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 HSP90B1P14625 803 aaKnown RBP9.61□□□□□ -0.87
PRKCH-225ENST00000557559 EIF2S2P20042 333 aaKnown RBP9.61□□□□□ -0.87
PRKCH-225ENST00000557559 SREBF2Q12772 1141 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 TCIRG1Q13488 830 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 PDIA6Q15084 440 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 DLK2Q6UY11 383 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 AGBL3Q8NEM8 1001 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-225ENST00000557559 ZNF296Q8WUU4 475 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-225ENST00000557559 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
PRKCH-225ENST00000557559 PSME4Q14997 1843 aa9.61□□□□□ -0.87
PRKCH-225ENST00000557559 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
PRKCH-225ENST00000557559 VIL1P09327 827 aaKnown RBP9.6□□□□□ -0.87
PRKCH-225ENST00000557559 NF2P35240 595 aa9.6□□□□□ -0.87
PRKCH-225ENST00000557559 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-225ENST00000557559 SF3B3Q15393 1217 aaKnown RBP9.6□□□□□ -0.87
PRKCH-225ENST00000557559 ANGEL2Q5VTE6 544 aaKnown RBP9.6□□□□□ -0.87
PRKCH-225ENST00000557559 COPS6Q7L5N1 327 aa9.6□□□□□ -0.87
PRKCH-225ENST00000557559 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
PRKCH-225ENST00000557559 POLLQ9UGP5 575 aa9.6□□□□□ -0.87
PRKCH-225ENST00000557559 POLR2AP24928 1970 aaKnown RBP9.6□□□□□ -0.87
PRKCH-225ENST00000557559 TAF1P21675 1872 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 GPR25O00155 361 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 AIMP1Q12904 312 aaKnown RBP9.59□□□□□ -0.87
PRKCH-225ENST00000557559 PROSER3Q2NL68 480 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 TBC1D16Q8TBP0 767 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 XAGE3Q8WTP9 111 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 CELF1Q92879 486 aaKnown RBP9.59□□□□□ -0.87
PRKCH-225ENST00000557559 CFHR5Q9BXR6 569 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
PRKCH-225ENST00000557559 RBBP6Q7Z6E9 1792 aaKnown RBP9.58□□□□□ -0.88
PRKCH-225ENST00000557559 SCN9AQ15858 1988 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 FKTNO75072 461 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 TBC1D8O95759 1140 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 ALDH1A1P00352 501 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 ANXA1P04083 346 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 TM4SF4P48230 202 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 GPSM2P81274 684 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 SCARF1Q14162 830 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 DOK7Q18PE1 504 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 HABP4Q5JVS0 413 aaKnown RBP9.58□□□□□ -0.88
PRKCH-225ENST00000557559 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
PRKCH-225ENST00000557559 RSBN1LQ6PCB5 846 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-225ENST00000557559 PLEKHF1Q96S99 279 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 ANKIB1Q9P2G1 1089 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
PRKCH-225ENST00000557559 UFL1O94874 794 aa9.57□□□□□ -0.88
PRKCH-225ENST00000557559 USP17L8P0C7I0 530 aa9.57□□□□□ -0.88
PRKCH-225ENST00000557559 MMP14P50281 582 aa9.57□□□□□ -0.88
PRKCH-225ENST00000557559 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
PRKCH-225ENST00000557559 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
PRKCH-225ENST00000557559 PLBD2Q8NHP8 589 aa9.57□□□□□ -0.88
PRKCH-225ENST00000557559 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
PRKCH-225ENST00000557559 COL1A1P02452 1464 aaPredicted RBP9.56□□□□□ -0.88
PRKCH-225ENST00000557559 HOXB7P09629 217 aa9.56□□□□□ -0.88
PRKCH-225ENST00000557559 FAM89AQ96GI7 184 aa9.56□□□□□ -0.88
PRKCH-225ENST00000557559 KCNQ5Q9NR82 932 aa9.56□□□□□ -0.88
PRKCH-225ENST00000557559 HTTP42858 3142 aa9.56□□□□□ -0.88
PRKCH-225ENST00000557559 ASTN2O75129 1339 aaPredicted RBP9.56□□□□□ -0.88
PRKCH-225ENST00000557559 XDHP47989 1333 aa9.56□□□□□ -0.88
PRKCH-225ENST00000557559 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 IRS4O14654 1257 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-225ENST00000557559 CCDC152Q4G0S7 254 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 ARMC9Q7Z3E5 817 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 ISCA1Q9BUE6 129 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 COL4A1P02462 1669 aa9.55□□□□□ -0.88
PRKCH-225ENST00000557559 UBE2Q2LH0YL09 131 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 RIPK4P57078 832 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 INHBEP58166 350 aa9.54□□□□□ -0.88
PRKCH-225ENST00000557559 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms