RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 ANKRD20A12PQ8NF67 263 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 TM6SF1Q9BZW5 370 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 SLIT3O75094 1523 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 NEURL1BA8MQ27 555 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 PPFIA3O75145 1194 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 TCEANC2Q96MN5 208 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 SCAND2PQ9GZW5 306 aaPredicted RBP9.24□□□□□ -0.93
SV2B-206ENST00000557410 NOL7Q9UMY1 257 aaKnown RBP9.24□□□□□ -0.93
SV2B-206ENST00000557410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
SV2B-206ENST00000557410 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 PTCD1O75127 700 aaKnown RBP9.24□□□□□ -0.93
SV2B-206ENST00000557410 UBE2HP62256 183 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 NECTIN1Q15223 517 aa9.24□□□□□ -0.93
SV2B-206ENST00000557410 TRMT1Q9NXH9 659 aaKnown RBP9.24□□□□□ -0.93
SV2B-206ENST00000557410 UTYO14607 1347 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 DYNC1I1O14576 645 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 MARCH6O60337 910 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 OFD1O75665 1012 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 GUCY1B3Q02153 619 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 PDE4CQ08493 712 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 GCKRQ14397 625 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 ZNF335Q9H4Z2 1342 aaPredicted RBP9.23□□□□□ -0.93
SV2B-206ENST00000557410 ERICH2A1L162 156 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 CCDC66A2RUB6 948 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 DHX16O60231 1041 aaKnown RBP9.23□□□□□ -0.93
SV2B-206ENST00000557410 TNNT1P13805 278 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 FKBP4Q02790 459 aaKnown RBP eCLIP9.23□□□□□ -0.93
SV2B-206ENST00000557410 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 TMEM87AQ8NBN3 555 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 CLSTN1O94985 981 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 PHKG2P15735 406 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 NOLC1Q14978 699 aaKnown RBP eCLIP9.23□□□□□ -0.93
SV2B-206ENST00000557410 PTPN14Q15678 1187 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 ME3Q16798 604 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 HSP90B2PQ58FF3 399 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 MAP4K1Q92918 833 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 ZNF496Q96IT1 587 aaPredicted RBP9.23□□□□□ -0.93
SV2B-206ENST00000557410 METTL22Q9BUU2 404 aaPredicted RBP9.23□□□□□ -0.93
SV2B-206ENST00000557410 RGPD5Q99666 1765 aa9.23□□□□□ -0.93
SV2B-206ENST00000557410 SLC27A2O14975 620 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 DNM1Q05193 864 aaKnown RBP9.22□□□□□ -0.93
SV2B-206ENST00000557410 RRP12Q5JTH9 1297 aaKnown RBP9.22□□□□□ -0.93
SV2B-206ENST00000557410 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 CRYBG1Q9Y4K1 1723 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 STARD3NLO95772 234 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 ZNF165P49910 485 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 KRT32Q14532 448 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 EPHA10Q5JZY3 1008 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 ERICH4A6NGS2 130 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 SNRPA1P09661 255 aaKnown RBP9.22□□□□□ -0.93
SV2B-206ENST00000557410 ZCRB1Q8TBF4 217 aaKnown RBP9.22□□□□□ -0.93
SV2B-206ENST00000557410 KCNB2Q92953 911 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 CLIP2Q9UDT6 1046 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 MTMR6Q9Y217 621 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
SV2B-206ENST00000557410 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.93
SV2B-206ENST00000557410 UBE3BQ7Z3V4 1068 aa9.21□□□□□ -0.93
SV2B-206ENST00000557410 TPCN1Q9ULQ1 816 aa9.21□□□□□ -0.93
SV2B-206ENST00000557410 SKIDA1Q1XH10 827 aa9.21□□□□□ -0.93
SV2B-206ENST00000557410 EDC3Q96F86 508 aaKnown RBP9.21□□□□□ -0.93
SV2B-206ENST00000557410 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.93
SV2B-206ENST00000557410 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.94
SV2B-206ENST00000557410 FAM177BA6PVY3 158 aa9.21□□□□□ -0.94
SV2B-206ENST00000557410 TFCP2Q12800 502 aa9.21□□□□□ -0.94
SV2B-206ENST00000557410 CCDC70Q6NSX1 233 aa9.21□□□□□ -0.94
SV2B-206ENST00000557410 KDM6AO15550 1401 aaPredicted RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 SIPA1L3O60292 1781 aaPredicted RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 UVSSAQ2YD98 709 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 JMYQ8N9B5 988 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 UBXN4Q92575 508 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 BTG4Q9NY30 223 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 A0A087WZG4 1122 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 ZNF500O60304 480 aaPredicted RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 IL2RBP14784 551 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 ZNF589Q86UQ0 364 aaPredicted RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 SFPQP23246 707 aaKnown RBP eCLIP9.2□□□□□ -0.94
SV2B-206ENST00000557410 RPS6KB1P23443 525 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 CCT2P78371 535 aaKnown RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 MAPK8IP2Q13387 824 aaPredicted RBP9.2□□□□□ -0.94
SV2B-206ENST00000557410 CFAP100Q494V2 611 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 TNNI3KQ59H18 835 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 CCDC158Q5M9N0 1113 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 CCDC186Q7Z3E2 898 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 MTMR7Q9Y216 660 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 FPGT-TNNI3KV9GXZ4 949 aa9.2□□□□□ -0.94
SV2B-206ENST00000557410 DDB1Q16531 1140 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 VPS37DQ86XT2 251 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 KIF18AQ8NI77 898 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 PRIMPOLQ96LW4 560 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 COPRSQ9NQ92 184 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 TRPM3Q9HCF6 1732 aaPredicted RBP9.19□□□□□ -0.94
SV2B-206ENST00000557410 ST3GAL1Q11201 340 aa9.19□□□□□ -0.94
SV2B-206ENST00000557410 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms