RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 NMRK2Q9NPI5 230 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 SBF1O95248 1867 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 UFL1O94874 794 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 GNAI3P08754 354 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 MS4A1P11836 297 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 ZKSCAN2Q63HK3 967 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 SMC1BQ8NDV3 1235 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 TBC1D16Q8TBP0 767 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 HACL1Q9UJ83 578 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 MINPP1Q9UNW1 487 aa9.86□□□□□ -0.83
PSEN1-222ENST00000557356 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 NBPF7P0C2Y1 421 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-222ENST00000557356 UBTFL1P0CB47 393 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-222ENST00000557356 INTS3Q68E01 1043 aaKnown RBP9.85□□□□□ -0.83
PSEN1-222ENST00000557356 CIAPIN1Q6FI81 312 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 ATF7IPQ6VMQ6 1270 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 LDHAL6AQ6ZMR3 332 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 PODNQ7Z5L7 613 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-222ENST00000557356 USP44Q9H0E7 712 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 POLLQ9UGP5 575 aa9.85□□□□□ -0.83
PSEN1-222ENST00000557356 DDX60Q8IY21 1712 aaKnown RBP9.85□□□□□ -0.83
PSEN1-222ENST00000557356 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 KCNJ4P48050 445 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 MMP14P50281 582 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 CXCL9Q07325 125 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-222ENST00000557356 CNNM1Q9NRU3 951 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 GJA3Q9Y6H8 435 aa9.84□□□□□ -0.83
PSEN1-222ENST00000557356 H7C1D1 291 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 RPS12P25398 132 aaKnown RBP9.83□□□□□ -0.84
PSEN1-222ENST00000557356 EPHX2P34913 555 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 DPF2Q92785 391 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 SUCLG2Q96I99 432 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 COA1Q9GZY4 146 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 TAF1DQ9H5J8 278 aaPredicted RBP9.83□□□□□ -0.84
PSEN1-222ENST00000557356 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 LAMB2P55268 1798 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
PSEN1-222ENST00000557356 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 ZNF541Q9H0D2 1346 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 DICER1Q9UPY3 1922 aaKnown RBP9.82□□□□□ -0.84
PSEN1-222ENST00000557356 POTECB2RU33 542 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 ECE2O60344 883 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 BCAR3O75815 825 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 CHRNDQ07001 517 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 C15orf52Q6ZUT6 534 aaKnown RBP9.82□□□□□ -0.84
PSEN1-222ENST00000557356 USP50Q70EL3 339 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-222ENST00000557356 LDHDQ86WU2 507 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 FTSJ3Q8IY81 847 aaKnown RBP9.82□□□□□ -0.84
PSEN1-222ENST00000557356 CHMP4BQ9H444 224 aaKnown RBP9.82□□□□□ -0.84
PSEN1-222ENST00000557356 BICC1Q9H694 974 aaKnown RBP9.82□□□□□ -0.84
PSEN1-222ENST00000557356 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
PSEN1-222ENST00000557356 CCDC88AQ3V6T2 1871 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 MED23Q9ULK4 1368 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 RAD17O75943 681 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 VIL1P09327 827 aaKnown RBP9.81□□□□□ -0.84
PSEN1-222ENST00000557356 TRIM27P14373 513 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 HSPA6P17066 643 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 APLP1P51693 650 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 UBE4AQ14139 1066 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 EPHA10Q5JZY3 1008 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.81□□□□□ -0.84
PSEN1-222ENST00000557356 AGBL3Q8NEM8 1001 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 KAZALD1Q96I82 304 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 DBNDD1Q9H9R9 158 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 ADARB2Q9NS39 739 aaKnown RBP9.81□□□□□ -0.84
PSEN1-222ENST00000557356 GPRC5DQ9NZD1 345 aa9.81□□□□□ -0.84
PSEN1-222ENST00000557356 WDR90Q96KV7 1748 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 USP17L3A6NCW0 530 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 USP17L4A6NCW7 530 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-222ENST00000557356 USP17L1Q7RTZ2 530 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 ZNF804AQ7Z570 1209 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 DZIP1LQ8IYY4 767 aaKnown RBP9.8□□□□□ -0.84
PSEN1-222ENST00000557356 ZC3H15Q8WU90 426 aaKnown RBP9.8□□□□□ -0.84
PSEN1-222ENST00000557356 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 MYO3BQ8WXR4 1341 aa9.8□□□□□ -0.84
PSEN1-222ENST00000557356 LRRC37AA6NMS7 1700 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 PSMD14O00487 310 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 GNAI2P04899 355 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 GMPSP49915 693 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-222ENST00000557356 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 STRIP1Q5VSL9 837 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 OGFOD1Q8N543 542 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 ANKRD44Q8N8A2 993 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 CNOT7Q9UIV1 285 aaKnown RBP9.79□□□□□ -0.84
PSEN1-222ENST00000557356 RCAN3Q9UKA8 241 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 RIPOR2Q9Y4F9 1068 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 TIAM2Q8IVF5 1701 aa9.79□□□□□ -0.84
PSEN1-222ENST00000557356 MYH3P11055 1940 aa9.78□□□□□ -0.84
PSEN1-222ENST00000557356 EYA2O00167 538 aa9.78□□□□□ -0.84
PSEN1-222ENST00000557356 PLIN1O60240 522 aa9.78□□□□□ -0.84
PSEN1-222ENST00000557356 TAF5LO75529 589 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms