RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ERVH48-1M5A8F1 160 aa6.98□□□□□ -1.29
ATXN3-247ENST00000557311 ACSBG1Q96GR2 724 aa6.98□□□□□ -1.29
ATXN3-247ENST00000557311 PCDHB11Q9Y5F2 797 aa6.98□□□□□ -1.29
ATXN3-247ENST00000557311 HSPA6P17066 643 aa6.97□□□□□ -1.29
ATXN3-247ENST00000557311 RELBQ01201 579 aa6.97□□□□□ -1.29
ATXN3-247ENST00000557311 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
ATXN3-247ENST00000557311 SLFNL1Q499Z3 407 aa6.97□□□□□ -1.29
ATXN3-247ENST00000557311 SLC27A3Q5K4L6 730 aa6.97□□□□□ -1.29
ATXN3-247ENST00000557311 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
ATXN3-247ENST00000557311 CCDC7Q96M83 1385 aa6.96□□□□□ -1.29
ATXN3-247ENST00000557311 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 VSIG8P0DPA2 414 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 IRF5Q13568 498 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 AGBL1Q96MI9 1066 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 TSEN34Q9BSV6 310 aaKnown RBP6.96□□□□□ -1.3
ATXN3-247ENST00000557311 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 UTRNP46939 3433 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 CRYBG1Q9Y4K1 1723 aa6.96□□□□□ -1.3
ATXN3-247ENST00000557311 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 USP6P35125 1406 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 PPIP5K1Q6PFW1 1433 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 MAN1A2O60476 641 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 GPR37L1O60883 481 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 IL2RBP14784 551 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-247ENST00000557311 RNF135Q8IUD6 432 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 MEIOBQ8N635 442 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 NLRP2Q9NX02 1062 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 CEP126Q9P2H0 1117 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 LMO7Q8WWI1 1683 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 PARP4Q9UKK3 1724 aaKnown RBP6.95□□□□□ -1.3
ATXN3-247ENST00000557311 TTC21BQ7Z4L5 1316 aa6.95□□□□□ -1.3
ATXN3-247ENST00000557311 CENPJQ9HC77 1338 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-247ENST00000557311 MYOM1P52179 1685 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 PEAK1Q9H792 1746 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 ESPNB1AK53 854 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 NBPF1Q3BBV0 1214 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 CLUAP1Q96AJ1 413 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 ZNF395Q9H8N7 513 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-247ENST00000557311 POLMQ9NP87 494 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-247ENST00000557311 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
ATXN3-247ENST00000557311 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
ATXN3-247ENST00000557311 MYCP01106 439 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-247ENST00000557311 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
ATXN3-247ENST00000557311 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
ATXN3-247ENST00000557311 TTC21AQ8NDW8 1320 aa6.93□□□□□ -1.3
ATXN3-247ENST00000557311 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ATXN3-247ENST00000557311 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-247ENST00000557311 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
ATXN3-247ENST00000557311 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
ATXN3-247ENST00000557311 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
ATXN3-247ENST00000557311 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
ATXN3-247ENST00000557311 DOLKQ9UPQ8 538 aa6.92□□□□□ -1.3
ATXN3-247ENST00000557311 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
ATXN3-247ENST00000557311 CPSF1Q10570 1443 aaKnown RBP6.92□□□□□ -1.3
ATXN3-247ENST00000557311 MEN1O00255 615 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 SOX11P35716 441 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 GSK3AP49840 483 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 CC2D2BQ6DHV5 1058 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-247ENST00000557311 GPR161Q8N6U8 529 aaKnown RBP6.91□□□□□ -1.3
ATXN3-247ENST00000557311 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 SLIT3O75094 1523 aa6.91□□□□□ -1.3
ATXN3-247ENST00000557311 TTLL8A6PVC2 850 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 ADH1AP07327 375 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 KCNQ4P56696 695 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 Q6ZVU0 165 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
ATXN3-247ENST00000557311 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-247ENST00000557311 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-247ENST00000557311 INSM2Q96T92 566 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-247ENST00000557311 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.31
ATXN3-247ENST00000557311 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-247ENST00000557311 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
ATXN3-247ENST00000557311 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-247ENST00000557311 ADD1P35611 737 aaKnown RBP6.89□□□□□ -1.31
ATXN3-247ENST00000557311 KRT76Q01546 638 aa6.89□□□□□ -1.31
ATXN3-247ENST00000557311 NLRP3Q96P20 1036 aa6.89□□□□□ -1.31
ATXN3-247ENST00000557311 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
ATXN3-247ENST00000557311 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-247ENST00000557311 ITSN1Q15811 1721 aa6.89□□□□□ -1.31
ATXN3-247ENST00000557311 POM121CA8CG34 1229 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 LILRA1O75019 489 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 SKIP12755 728 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 PTGIRP43119 386 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 SCTRP47872 440 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 CYP2U1Q7Z449 544 aa6.88□□□□□ -1.31
ATXN3-247ENST00000557311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-247ENST00000557311 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
ATXN3-247ENST00000557311 CCDC85AQ96PX6 553 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-247ENST00000557311 CHD4Q14839 1912 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms